Gene Information

Name : Spea_3041 (Spea_3041)
Accession : YP_001502893.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 3731040 - 3731651 bp
Length : 612 bp
Strand : +
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: shw:Sputw3181_3638 response regulator receiver protein

DNA sequence : 
GTGCAACAACAGCTCAATGGTCCAGTCTATCTCGTCGATGATGACGAAGCGATTATCGACTCAATCAGTTTTCTAATGGA
AGGTTTTGGCTATCAACTCCGCAGCTTTAACAGTGGCGATCGTTTCTTGAAAGAGGTCGACTTAACCCTAGCTGGATGCG
TAATTTTAGATGCACGAATGCCGGGGCTGACTGGTCCTCAGGTGCAGCAGCTGCTAAGCGATGCTAACAGCCCATTGGCG
GTGATTTTCTTAACTGGCCATGGCGATGTACCTATGGCTGTGGATGCTTTTAAGAATGGCGCTTTTGACTTCTTCCAAAA
GCCCGTTCAGGGGAGCATACTGGCACAAGCTATTGCTAAAGGGCTAACCAACAGTCTTGAACAGCACCTGAAACTCACAG
ACCAAGCCTTAATCGATACCTTGTCGGAGCGGGAAGCCCAGATTTTCCAATTAGTCATTGCTGGCAATACCAATAAGCAG
ATGGCAAATGAGCTTTGTGTTGCGATTCGTACTATCGAAGTTCATCGCTCAAAACTGATGACTAAGCTCGGAGTGAGCAA
CCTGGCTGAGTTAGTCAAACTCGCGCCATTGTTAGCAGAGAAGAACGGATAA

Protein sequence : 
MQQQLNGPVYLVDDDEAIIDSISFLMEGFGYQLRSFNSGDRFLKEVDLTLAGCVILDARMPGLTGPQVQQLLSDANSPLA
VIFLTGHGDVPMAVDAFKNGAFDFFQKPVQGSILAQAIAKGLTNSLEQHLKLTDQALIDTLSEREAQIFQLVIAGNTNKQ
MANELCVAIRTIEVHRSKLMTKLGVSNLAELVKLAPLLAEKNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 6e-33 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 6e-33 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 6e-33 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 4e-33 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 6e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_3041 YP_001502893.1 two component LuxR family transcriptional regulator VFG0488 Protein 2e-33 41