Gene Information

Name : Spea_3038 (Spea_3038)
Accession : YP_001502890.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 3725818 - 3726390 bp
Length : 573 bp
Strand : -
Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shn:Shewana3_3618 4Fe-4S ferredoxin, iron-sulfur binding domain protein

DNA sequence :
ATGACTAAGCGTTATGTTCTCGTGCACGATGAAAACAAGTGCATTGGCTGTCAGGCTTGTAACGTGGCTTGCCGTAGTGA
AAACAATGTGCCTGAGTCGGTGACTCGTATTCAGGTGAGAATTGAGGGGCCTTACGGCAACTTCCCGCACCTACATTTTA
AGTATAACCGCGTCTCTTGTGAGCAGTGTGAAAACGCGCCTTGCGTTAAGGTGTGTCCAACCGGCGCAGCCTATGTTAAT
GATGACGGCATTGTATCGATTAACGAGAAGAAGTGTGTCGGCTGTCTATATTGTGTCGCGGCTTGTCCTTACAAGGTGCG
TTTCATTAACCCTGAAACCCGAGTGCCTGATAAGTGCGATTTCTGTAAAGAAACACGCTTGGCTCGAGGTGAAGAGCCTG
CTTGTGTCACGGTTTGCCCAACCCAAGCACTGGTGTTTGGTGATGCCAATGACATGACATCGGAAGTGCGCAAAGTGCTA
GACACAAAAAATCACTACCAACAGAAGGTAAACCTTGGCACTGAGCCACGTGTCTACCGCATTCCTAGCCGTAAAGGAGG
GATCAAAGCATGA

Protein sequence :
MTKRYVLVHDENKCIGCQACNVACRSENNVPESVTRIQVRIEGPYGNFPHLHFKYNRVSCEQCENAPCVKVCPTGAAYVN
DDGIVSINEKKCVGCLYCVAACPYKVRFINPETRVPDKCDFCKETRLARGEEPACVTVCPTQALVFGDANDMTSEVRKVL
DTKNHYQQKVNLGTEPRVYRIPSRKGGIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 5e-29 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 5e-29 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-29 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-29 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_3038 YP_001502890.1 4Fe-4S ferredoxin VFG0486 Protein 1e-29 42