Gene Information

Name : Spea_2664 (Spea_2664)
Accession : YP_001502519.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 3246844 - 3248025 bp
Length : 1182 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: slo:Shew_2491 methionine gamma-lyase

DNA sequence :
ATGCAAGATAGATGGCAATTAGCCACAAAAGTGATCCATGCTGGGCGTGAGGCTAATGAGTCTGGCGCACTCGTGACACC
TTTGTGCCAGAGTGCGACCTTTGTATTTGAGACCGCAGAGCAGGGCGGAGCAAGGTTTGCGGGTGATGAGCAAGGTTATA
TCTATACCCGCTTGGGTAACCCGACGACGGCGGAGCTTGAGCGTAAAATTGCCGCACTCGAGGGAAGCGATGCTGCGGCT
GCTACTGCATCGGGAATGGCGGCGGTTTCTGCAGCCTTGCTGGCAAACTTAAGCCATGGCGATCATTTAGTGGCATCCCA
TGCTGTTTATGGCTGCACCTTTTCCCTTATGACCTCACAACTCGTTAAGTTTGGTATCGAGGTGACGCTAGTTAACTTTA
GCGACGAAACAGAGATTAAAGCGGCAATAAAGCCCAATACCAAAGTGATATTTTGTGAGACACCGGTAAACCCTCATCTC
GATGTGTACAACCTCGATCTGATAGCTGCCATAGCTAAGCAACACAATTTAGTGAGTGTGGTGGATAACACCTTTATGAC
ACCACTACTGCAACAACCGATTAAGCATGGCATCGATATTGTTATTCACAGTGCAACAAAGTACCTCAATGGTCACGGTG
ATGTTATCGCTGGGCTTATTTGTGCCAGCGTTGAACAGATGGAAGTGATTAAGTTTGAAATACTGAAAGATGTTGGCGCG
GTGATTTCGCCCCACGATGCCTGGTTAATTCTACGTGGATTAAAAACCTTAGACGTCCGATTAACCCGACACTGTGATAA
TGCCGAGAAAGTCGCAAGTTACCTTGAGGGTCACCCGAAAGTGTCCAAAGTGTACTACCCGGGTCTTGAAAGTCATCCTG
GACATTCGCTTATAGGCACCCAGATGCGTAGGGGCGGAGGCGTAATAGCCTTCGAGCTAGAAGCAAGTCTTGAACAATCC
ATCGCATTCATTAATCGATTATCACTGTTTTCTATCGCCGTCAGTCTTGGTGATGCGGAGTCATTAATTCAGCACCCAGC
ATCAATGACACATTCACCATACAGTGAAGATGAACGTATTAAGGCAGGTATTAAAGATAACTTACTGAGGATTTCTGTGG
GCTTAGAATCGGTAGAAGATATTATTCAGGCTCTGGAAGATGGCCTAGCGAGTGTAGAGTAG

Protein sequence :
MQDRWQLATKVIHAGREANESGALVTPLCQSATFVFETAEQGGARFAGDEQGYIYTRLGNPTTAELERKIAALEGSDAAA
ATASGMAAVSAALLANLSHGDHLVASHAVYGCTFSLMTSQLVKFGIEVTLVNFSDETEIKAAIKPNTKVIFCETPVNPHL
DVYNLDLIAAIAKQHNLVSVVDNTFMTPLLQQPIKHGIDIVIHSATKYLNGHGDVIAGLICASVEQMEVIKFEILKDVGA
VISPHDAWLILRGLKTLDVRLTRHCDNAEKVASYLEGHPKVSKVYYPGLESHPGHSLIGTQMRRGGGVIAFELEASLEQS
IAFINRLSLFSIAVSLGDAESLIQHPASMTHSPYSEDERIKAGIKDNLLRISVGLESVEDIIQALEDGLASVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-57 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_2664 YP_001502519.1 cystathionine gamma-synthase BAC0207 Protein 2e-74 47