Gene Information

Name : Spea_2289 (Spea_2289)
Accession : YP_001502144.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Resistance
Product : hexapaptide repeat-containing transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2773448 - 2774098 bp
Length : 651 bp
Strand : -
Note : PFAM: transferase hexapeptide repeat containing protein; KEGG: vha:VIBHAR_07054 hypothetical protein

DNA sequence : 
ATGAACGAGTTTACCAGTTGGCTTGATTCTAAAAAGCTCAAACAGCAAGTCGTTAACCCAAATATCGAAGTAGGGGAGTA
CTCTTACTATTCAGGTTTTTATCACGGCAAATCTTTTGAAGATCAAGCTGTGCGTTACCTGCTCGGTGATGGCTCGACCA
TAGATGTGTGGGAGGCGGGAGTATTTGGTGAAGTCGATAAGCTGATTATCGGTAAGTTCTGCTCCATCGCCTCTGGCGCG
TGTTTTATGTTGGCGGGCAATCAGGGCCATCGTTTGGATTGGATCTCCACCTATCCATTTTCCGAAGAAACATTTGGTGA
TGGGGTAAAGAGTGGCTTCGAGCGTGCGGGCAATACGGTTATCGGCAACGATGTATGGATTGGATCTGAGGCGATGATTA
TGCCTGGGGTGAGCATAGGTGACGGCGCAGTGATTGGCGCACGAGCGGTGATCTCCAAAGATGTAGCGCCATACACAGTC
GTTGTTGGCAGCAATAAACTTGTGAAGCAACGTTTCGATAGTGATTCGGTTTCTAAGCTTTTACAGATGAAATGGTGGGA
TTGGCCGCTAGATAAGCTTAAAGGCGCGATGCCATTGATGTGTAGCGCAGATATTGAAGCTTTATATCAATACCACCTTG
AGCATAAATAG

Protein sequence : 
MNEFTSWLDSKKLKQQVVNPNIEVGEYSYYSGFYHGKSFEDQAVRYLLGDGSTIDVWEAGVFGEVDKLIIGKFCSIASGA
CFMLAGNQGHRLDWISTYPFSEETFGDGVKSGFERAGNTVIGNDVWIGSEAMIMPGVSIGDGAVIGARAVISKDVAPYTV
VVGSNKLVKQRFDSDSVSKLLQMKWWDWPLDKLKGAMPLMCSADIEALYQYHLEHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-44 55
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-44 55
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-44 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase AF322577.2.gene4.p01 Protein 1e-44 55
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase AY740681.1.gene5.p01 Protein 1e-44 55
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase AY123251.gene2.p01 Protein 4e-45 55
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase JF268688.1.gene6.p01 Protein 1e-42 54
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase NC_002516.2.878374.p Protein 2e-43 52
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase CP001581.1.gene990.p Protein 2e-49 47
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase NC_011586.7045146.p0 Protein 2e-26 45
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase NC_010410.6000796.p0 Protein 3e-26 42
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase NC_011595.7057349.p0 Protein 3e-26 42
Spea_2289 YP_001502144.1 hexapaptide repeat-containing transferase AM180355.1.gene2499. Protein 3e-34 41