Gene Information

Name : Spea_2048 (Spea_2048)
Accession : YP_001501903.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2481285 - 2482499 bp
Length : 1215 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGCGCCCTATTATCAAATCCAACAAATTAGATTCTGTATGTTACGACATTCGTGGTCCAGTACATAAAGAAGCCCGTCG
TCTTGAAGATGAAGGTCACCGTATTCTTAAACTGAATATTGGTAACCCAGCCCCATTTGGATTTGAGGCACCAGAAGAGA
TCGTGCGAGATGTAATTTTAAATCTACCGAGCGCGCAAGGCTACTGTGAGTCGAAAGGTCTGTTTTCTGCGCGTAAAGCG
ATCGTGCAACATTACCAGTCTCAGGGGATCTTCGGTGTCGATATTGAAGACATCTATATCGGTAATGGTGTATCTGAGCT
TATTGTTATGGCTATGCAAGGTCTACTGAATAGTGGTGATGAAGTTTTGGTTCCTTCACCTGACTACCCTTTATGGACTG
CAGCTGTGCACCTGTCTGGCGGTAAAGCACAGCATTACCGTTGTGATGAAGAATCAGATTGGTTCCCAGATCTTGAAGAT
ATTAAAAGCAAAATTACCCCAAGAACTCGCGGTCTTGTGTTGATTAACCCGAATAATCCAACAGGAGCAGTTTACTCCAA
GGAACTGATCCTTGAAGTGATCGAGCTTTGTCGTCAAAACGATATGATTCTGTTCGCCGACGAAATCTACGATAAGATCT
TGTATGATGAAGCTGTTCATATTCCTGCTGCAAGTCTATCGGATGACATCTTAACCGTTACCTTTAACGGCCTATCAAAG
GTTTACCGTGCGGCCGGCTTCCGCGTGGGATGGATGATGCTAACTGGTAACAAAAAAGCGGCAAAGAGTTATGTTGAAGG
CTTAGATATGCTGGCATCAATGCGTCTGTGCGCAAACGTGCCAAGTCAGCATGCTATTCAAACAGCATTGGGTGGCTATC
AGAGCATTCAAGAGTTAGTGCAGCCTGGCGGACGTTTACGCGTGCAGCGTGATGCCTGTGTTGAAATGCTCAACTCTATT
CCTGGTGTCAGTGTTAAAACGCCGAAAGGTGCTTTATATGCGTTTGCTAAGTTAGATCAAAAGAAATTTAACCTGCGTGA
CGATGAACGCTTAGTGCTTGATTTACTAAAAGACCGTAAGATCTTATTAGTTCAAGGCTCGGCATTTAATTATCCAGAAC
CTGATCATGTTCGTGTCGTATTTTTGCCTTACAAAGAAGAACTAACCAAAGCCTTATCTGAATTTGGTGATTTCTTAGCT
AATTATAAGCAGTAA

Protein sequence :
MRPIIKSNKLDSVCYDIRGPVHKEARRLEDEGHRILKLNIGNPAPFGFEAPEEIVRDVILNLPSAQGYCESKGLFSARKA
IVQHYQSQGIFGVDIEDIYIGNGVSELIVMAMQGLLNSGDEVLVPSPDYPLWTAAVHLSGGKAQHYRCDEESDWFPDLED
IKSKITPRTRGLVLINPNNPTGAVYSKELILEVIELCRQNDMILFADEIYDKILYDEAVHIPAASLSDDILTVTFNGLSK
VYRAAGFRVGWMMLTGNKKAAKSYVEGLDMLASMRLCANVPSQHAIQTALGGYQSIQELVQPGGRLRVQRDACVEMLNSI
PGVSVKTPKGALYAFAKLDQKKFNLRDDERLVLDLLKDRKILLVQGSAFNYPEPDHVRVVFLPYKEELTKALSEFGDFLA
NYKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-106 57
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-106 57
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-106 57
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-106 57