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Name : Spea_1985 (Spea_1985) Accession : YP_001501842.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 2411113 - 2411850 bp Length : 738 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGAATGTAACCTTATTAATCCCTGCGCGATATGGATCGAGTCGTTTTCCAGGTAAGCCATTGGCTCATATCAATGGTAA GCCAATGATCCAGCACGTTTACGAGCGTGCATCTTTAGCTAAAGGGCTTAAAGACATCTATGTCGCCACCGATGATGTGC GCATTAAAAACGCTGTAGAGAGTTTTGGTGGCAAGGTTGTTATGACAGGTGAAAATGCCGCATCTGGTACAGACCGTATC GATGAAGCTATTTCAATACTCGGCTTGGCTGATGATGACCTCGTCATTAATTTACAAGGTGATCAACCGCTTATCGACCC AATTGTTATTGAACAACTTGTAAGCGTGTGTGAACGCCATGCTGGTGAATTCGATATGGCGACGTTAGGCGTAGAGATAA AGGATGAAGCTCAGCTTAACGATCCAAACCATGTAAAAGTGGTATTCGATAATAACCATAACGCATTATACTTTTCTCGA GCGCGGATCCCTTTTGGCCGTGATACGAGCGACTACCCGGTATACAAGCACATAGGGATCTACGCCTATACTCGTAAATT TATTCAAACCTTTGCTAAGTTACCACTTGGTCGACTAGAAGAGTTAGAGAAGTTGGAACAACTTCGAGCGCTTGAGTACG GCTACAAAATCAAAGTTGCAATCAGCGCATTTGATTTCCCAGAAGTTGATACTCCTGAAGATATTCGAATCTGCGAAGCA AGACTTACCGTTGACTAA Protein sequence : MNVTLLIPARYGSSRFPGKPLAHINGKPMIQHVYERASLAKGLKDIYVATDDVRIKNAVESFGGKVVMTGENAASGTDRI DEAISILGLADDDLVINLQGDQPLIDPIVIEQLVSVCERHAGEFDMATLGVEIKDEAQLNDPNHVKVVFDNNHNALYFSR ARIPFGRDTSDYPVYKHIGIYAYTRKFIQTFAKLPLGRLEELEKLEQLRALEYGYKIKVAISAFDFPEVDTPEDIRICEA RLTVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-37 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 7e-38 | 46 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 5e-38 | 46 |
