Gene Information

Name : Spea_1953 (Spea_1953)
Accession : YP_001501810.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2376525 - 2377169 bp
Length : 645 bp
Strand : +
Note : in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate v

DNA sequence : 
TTGATCTCAGTATATTTAGTTGATGACCATGAGTTAGTAAGAACCGGTATTAGACGGATCCTCGAAGATGAGAGGGGTAT
TAAAGTCATCGGTGAGGCTGGCGATGGCGAAACTGCTGTGCAGTGGTGCCGCAAAAATGAAGCTGACGTGATTTTGATGG
ATATGAATATGCCGGGTATTGGCGGTTTAGAGGCGACACGTAAGATCTTACGTTTTCAAGCCCATGCCAAGATTATTGTG
CTAACCATTCATACTGAAGATCCTTTTCCGACCAAAGTTATGCAAGCAGGGGCTTCAGGTTATCTAACTAAAGGGGCGAC
TTCTCCAGAAGTACTGCAGGCAATTAGACAAGTGGCTCATGGACAAAGATATTTGTCACCTGAGATTGCTCAACAGATGG
CTCTGAGTCAGTTCAATCAATCTGAAGATAATCCATTTAAGACGTTATCGGAGAGAGAGCTGCAGATCATGCTGATGATC
ACCAATGGTGAAAAAGTGAGTGAGATCTCTGAGCAGTTAAATTTAAGTCCTAAAACAGTCAATAGTTATCGTTATCGTCT
GTTTGCTAAGTTAGGCATTGGTGGAGATGTAGAGCTGACTCGTTTAGCTATTCGATATAAAATGTTGGATACTGGACAAT
TCTAA

Protein sequence : 
MISVYLVDDHELVRTGIRRILEDERGIKVIGEAGDGETAVQWCRKNEADVILMDMNMPGIGGLEATRKILRFQAHAKIIV
LTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAHGQRYLSPEIAQQMALSQFNQSEDNPFKTLSERELQIMLMI
TNGEKVSEISEQLNLSPKTVNSYRYRLFAKLGIGGDVELTRLAIRYKMLDTGQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 9e-51 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 9e-51 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_1953 YP_001501810.1 response regulator VFG1889 Protein 4e-52 51