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Name : Spea_1860 (Spea_1860) Accession : YP_001501718.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Unknown Product : Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 2264244 - 2265818 bp Length : 1575 bp Strand : + Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: slo:Shew_2159 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor DNA sequence : ATGCGAAACAACCAACCCGTGACTCAAACGGAAAAGACTCTAACCGATAATTGTATTTTACTGTCGACCACCAATCTTGA CGGTAATATTAAGTATGCCAATGAGAGCTTTACCAAGGTTAGTGGCTACAGTTTTGATGAGTTACAAGGTCAACCTCACA ACATGGTGCGGCACCCTGATATGCCAGAGGCTGCCTTTCAGTCACTTTGGGAGCGTATTAAACAAGGGAAACCTTGGGTT GGTATTGTTAAGAATCGCACCAAGTCAGGCGATCACTACTGGGTTAATGCATATATAGCCCCTGTGTATGAAAATGGCAA AATCCACGAGTATCAGTCGGTACGCCGTAAGGCTACACCGGAGCAAATCCTGCGCGCAGAAGCGATTTACCAGCAGGTAA AAGCGGGAAAGCAACCTAAGGCGCTACGCAACCCGCTACTAGGTTTTGGGGCAAAGTTGTATGCTTGGCTGCTGTCGATG TTAGTGATGGCGGTTATTTTAGCGAGTTATTCACCGATAGCTGCAGTGATACTACTTAGCCTAGTTGGCGCGATTGGCTT GCACCGTATCTTGAAGCCATTCAACCAATTAGTGACACAAGCTAAAAATACTGTCGATGATCCTCTCGCTAAAGGTGTAT TTACCGGCCGGCAAGATGAATTAGGCACAATAAGCTTTGCGCTGCAGTTCTTACTTACAGAAACTGGCGGCGTGATAGGC CGAATGGCGGATTCAGCAGGCTCAATCGAGTCCCTTAGCGCGAGTTTAAACGATACCATTCACAATACCCGACAACGTGC CGACAGCCAGAGTATGCAAACCAGCCAAGCGGCCACCGCGATGGAAGAGATGAGCGCTAGCTTTGCTGAAGTGAATAATA ATATTCACAGCGCGGCGAGAGAGATGTCGGTGAGTAACCTTTCTGCAGAAAAGGGTCATCAACTGCTTGAACGGGTGATT GAGTCCATTACACAACTCAAAGATGAGGTGGGTAACTTTGCTTCAGTCGTCGCGTCAATCGAACAAGATAGCCAAGATAT CAATAAGGTATTGGAGGTGATCCGTGGCATTGCAGAGCAAACAAATCTGTTAGCACTTAACGCTGCGATTGAAGCGGCGA GGGCGGGAGAGTCGGGTCGAGGCTTTGCAGTGGTTGCCGATGAAGTGCGTCAACTTTCTAGCCGTACCAGTGAATCTACC TCTCATATCGAAGCCATTGTTGCTAAGTTCCGCGAAAGTACCGTTATGGCAGCTAAGACCATGGAGGCCGGTCAACGCAG TGCTGAGCAATCGGTAGACTTGGCAAAACAGGTTGATGAGTCATTTGAGGCACTACGTCACTCGATTATTAAGATGAATA CTATGAGTGATGAAAATGCTTGTGCTATGACACAGCAAACGACTGTCGCCAACGATATCAGCCACTCAATTCAAGTGATC AGTGAGCTCGCAATTGAGAGTCTTGAACAGACACAAGATGCGGCAGAGCGTGGTCAGCAAGTGTCTCGCCTATCGACTAA AACCCATAGTTTATCTAAGCAGTTCTGGGAGCAGAGCGTACAGAGAAAGATTTGA Protein sequence : MRNNQPVTQTEKTLTDNCILLSTTNLDGNIKYANESFTKVSGYSFDELQGQPHNMVRHPDMPEAAFQSLWERIKQGKPWV GIVKNRTKSGDHYWVNAYIAPVYENGKIHEYQSVRRKATPEQILRAEAIYQQVKAGKQPKALRNPLLGFGAKLYAWLLSM LVMAVILASYSPIAAVILLSLVGAIGLHRILKPFNQLVTQAKNTVDDPLAKGVFTGRQDELGTISFALQFLLTETGGVIG RMADSAGSIESLSASLNDTIHNTRQRADSQSMQTSQAATAMEEMSASFAEVNNNIHSAAREMSVSNLSAEKGHQLLERVI ESITQLKDEVGNFASVVASIEQDSQDINKVLEVIRGIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRQLSSRTSEST SHIEAIVAKFRESTVMAAKTMEAGQRSAEQSVDLAKQVDESFEALRHSIIKMNTMSDENACAMTQQTTVANDISHSIQVI SELAIESLEQTQDAAERGQQVSRLSTKTHSLSKQFWEQSVQRKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 9e-80 | 41 |
