Gene Information

Name : Spea_1661 (Spea_1661)
Accession : YP_001501520.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2012305 - 2013048 bp
Length : 744 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2402 ABC transporter-related protein

DNA sequence : 
ATGTCTGAAAATAGTGCCATAACCGTAAGTCACCTAGTTAAATCAGTTGTTACTCAAGAGGGAGAACTGACTATCCTCAA
CGGCATTAATATGGATGTCAAGCATGGCGAGAGTGTGGCTATCCTTGGACCTTCCGGTTCAGGTAAATCGACCTTGCTCG
GATTGCTTGCAGCACTCGACTCACCATCGAGTGGTTCAATAAAGCTCGATGGTGTCGCGTTAGAACAGTTAAACGAAGAG
TCGAAGGCTGCACTGCGAAAGCAAAAAGTGAGCTTTATTTTTCAGTCTTTTATGTTGGTCGATACATTAAATGCGCTTGA
GAACGTGATGCTGCCAGCCGAGCTCGCTGGTGTGGCTAAGGCGAAAGAAAAGGCCGAGGCCATGCTAGAGCGGGTGGGCT
TAAGTCATCGACTGACTCATTTTCCGAATCAGTTATCTGGCGGTGAGCAGCAAAGAGTGGCGATTGCCAGAGCCTTTATT
TGCGAGCCTAAGGTGCTGTTTGCCGATGAGCCGACAGGGAATCTAGACTCGGCCAATAGCGATAAGATTGCCGACATGCT
GTTTGAGCTGAATCGAGAGAGTGATACGACTTTAGTACTCGTCACTCATGATATGGAGCTTGCGAGCCGCTGTCAGCGCC
AATTCATCATGGATTCAGGCCGCTTGAATGAAAAACTTACTGAGCAGCCGCTTAACCTGAAAACGGCTACAGAGGTAACA
GAAGAGGCTAGCGCATGGAGTTAA

Protein sequence : 
MSENSAITVSHLVKSVVTQEGELTILNGINMDVKHGESVAILGPSGSGKSTLLGLLAALDSPSSGSIKLDGVALEQLNEE
SKAALRKQKVSFIFQSFMLVDTLNALENVMLPAELAGVAKAKEKAEAMLERVGLSHRLTHFPNQLSGGEQQRVAIARAFI
CEPKVLFADEPTGNLDSANSDKIADMLFELNRESDTTLVLVTHDMELASRCQRQFIMDSGRLNEKLTEQPLNLKTATEVT
EEASAWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-22 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_1661 YP_001501520.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-26 44
Spea_1661 YP_001501520.1 ABC transporter-like protein NC_008702.1.4606598. Protein 9e-26 42