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Name : Spea_0145 (Spea_0145) Accession : YP_001500009.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 161916 - 163487 bp Length : 1572 bp Strand : + Note : KEGG: slo:Shew_3618 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGAGTGAGAATTCAATTATAGTCGATGAAGAGCTAGTGCAGGTCTCGAATGAGCTTGGACTAGTGTCTGAGGAAGAGGC GGATCAGCTTTTTCATTCGAATAGCAAAGAGCGTTTGCCCTTTGCTTTTGCCCATAGATTTAAGGTGGCGCTTGCCGCCG ACGCTGACGGCGAGTTGTCGCTTTACCATACTCAAGGTACACCATTGAGTGCATTGCTTGAGGTACGTCGCTACTGTGGT AAAGAATTGCCCTTGATAACGTTAGAAGACACAGCTTTTGAGGCGCGTCTTACTCAAGCCTATCAAGCTAACTCTTCTGA AGCGCAGCAGATGATGGAAGATATCGGTAATGAAATGGACCTGTTCACTCTTGCCGAAGAGTTGCCACAAACAGAAGATC TACTCGAGGGTGACGATGACGCACCGATTATTAAGTTAATCAATGCGCTATTGTCTGAGGCTATTAAGGAAGAAGCGTCA GATATTCATATCGAAACCTACGAGAAACAGTTAATTGTGCGTTTCCGTGTCGATGGCATTCTCAAAGAAGTTCTCAAGCC TAATCGTAAACTGTCATCTTTGTTGGTGTCACGTATCAAGGTTATGGCACGTCTCGATATTGCTGAAAAACGTGTACCAC AAGATGGTCGCATTTCGCTGCGTATCGCGGGACGAGCTGTGGATGTGCGTGTATCGACTATGCCGTCAAGTCATGGCGAG CGTGTGGTGCTACGTCTACTCGATAAAAATGCGGGTAACTTAGACCTAGAGCAGCTAGGTATGACCGAAGCGGTTCGTCA TCAATTTGATGACTTAATCCGCAGACCACACGGTATTATTTTGGTGACCGGTCCAACCGGTTCGGGTAAGAGTACCACTC TCTATGCAGGCCTTACCGAAATTAACTCGAAAGATACCAACATTCTTACCGTCGAAGACCCAATAGAATACGAACTCGAA GGTATTGGTCAGACTCAGGTAAACACTAAGGTCGATATGACCTTCGCTCGTGGCCTACGTGCTATTTTGCGTCAAGATCC TGATGTGGTGATGATTGGTGAGATCCGAGATCTTGAGACTGCGCAAATTGCGGTTCAGGCATCGTTAACTGGCCATATGG TTATCTCAACCCTACATACTAATACGGCATCGGGCGCGATTACTCGTTTACAAGATATGGGCGTAGAACCTTTCCTCGTG TCTTCCAGTTTACTTGGTGTCCTCGCTCAACGTCTTATCCGTACCTTGTGCCCAAGCTGTAAAGAGTCGCATACCCCGGA TAATCGTGAAAGAGAGCTTCTCGGTATTACCGCTGACGATCCTCGTGTTATTTTCCGCGCGAAGGGTTGTCAGGCTTGTG GTCACAATGGTTATCGTGGCCGTACCGGTATTCATGAGTTACTCATAGTCGATGATCATGTGCGTGAACTTATTCACACC GGTCGCGGTGAATTAGCGATTGAAAAGCATATTCGTCAATCTGTTCCGAGCATTCGTCACGACGGTATGAGTAAAGTGCT TGCGGGGAAAACTACCCTAGAAGAAGTGCTGCGTGTCACTCGAGAGGAGTAA Protein sequence : MSENSIIVDEELVQVSNELGLVSEEEADQLFHSNSKERLPFAFAHRFKVALAADADGELSLYHTQGTPLSALLEVRRYCG KELPLITLEDTAFEARLTQAYQANSSEAQQMMEDIGNEMDLFTLAEELPQTEDLLEGDDDAPIIKLINALLSEAIKEEAS DIHIETYEKQLIVRFRVDGILKEVLKPNRKLSSLLVSRIKVMARLDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHGE RVVLRLLDKNAGNLDLEQLGMTEAVRHQFDDLIRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELE GIGQTQVNTKVDMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHMVISTLHTNTASGAITRLQDMGVEPFLV SSSLLGVLAQRLIRTLCPSCKESHTPDNRERELLGITADDPRVIFRAKGCQACGHNGYRGRTGIHELLIVDDHVRELIHT GRGELAIEKHIRQSVPSIRHDGMSKVLAGKTTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-157 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-157 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spea_0145 | YP_001500009.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-154 | 68 |
| Spea_0145 | YP_001500009.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-157 | 64 |
| Spea_0145 | YP_001500009.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-139 | 58 |
| Spea_0145 | YP_001500009.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-79 | 45 |
