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Name : Spea_0144 (Spea_0144) Accession : YP_001500008.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 159791 - 161923 bp Length : 2133 bp Strand : + Note : TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: slo:Shew_3619 general secretion pathway protein D DNA sequence : ATGAATAATAAGCGGATTAGACGCAGATTAATTGCCGGTATGGTGATGGGGGCTTCCTTACTGGCCCCACAACTTGCATG GTCTGAACAATATGCGGCTAACTTTAAAGGCACAGATATCCAAGAGTTTATCAATATTGTTGGTAAAAACTTGAATCGAA CTATTATTGTCGACCCAACCGTACGCGGAAAAATCAATGTTCGTAGTTACGATCTACTAAACGACGAACAGTATTACCAG TTCTTCCTCAACGTATTACAAGTCTATGGTTATGCTGTTGTCGAGATGGACAACAACATCATAAAGGTAATCAAAGATAA AGATGCTAAAACGGCATCAATCCGTGTCGCCGATGATGATGCACCAGGCTTGGGTGACGAGATGGTTACCCGTATCGTCG CACTGTATAACACAGAAGCAAAGCAGCTAGCCCCTCTATTACGTCAGCTAAACGATAACGCCGGCGGCGGTAACGTAGTT AACTACGATCCGTCCAATGTTTTGATGATCTCTGGTCGTGCGGCCGTGGTTAATAAACTGGTAGAGATCGTGCGCCGCGT AGATAAGCAAGGTGATACAGCCGTTGAAGTGGTTAAGCTTGAATATGCCTCAGCCGGTGAAATCGTTCGTATTATAGATA CCTTGTACCGTTCAACGGCTAATCAAGCACAGATGCCTGGCCAAGCACCAAAAGTTGTTGCCGATGAGCGTACCAACGCT GTGGTGGTAAGTGGTGATGAGAAGAGTCGTGAGCGAGTGGTTAAGCTGATTAAAAACCTAGATGCAGAGCAAGCAAGTAC GGGTAACACTAAGGTCCGCTACCTGCGTTATGCAAAAGCCGAAGATTTAGTCGAGGTGTTAACGGGTTTTGCTGAACAAC TTGTCGATGATAAAGGCACCTCACAAGGTGGCGGCAGCAAGCGTCGAAATGAAATTAATATCATGGCCCACAATGACACC AATGCCTTGGTGATTAGTGCGGAACCAGATCAGATGCGCACCATCGAGAGCGTGATTAATCAGCTGGATATTCGCCGAGC ACAAGTACTGGTTGAAGCGATCATTGTAGAAGTTGGCGAAGGTGATGATGTTGGTTTTGGTGTTCAGTGGGCAACCGAAG CTGGCGGTGGTACTCAGTTTAATAACCTAGGCCCAACCATTGGTGAAATTGGTGCAGGTGTTTGGCAGGCTCAAGGTGAA GAGGGCTCAACAGTCTGTAACGACGGTACTTGTACCGAGAATCCTGACACTCGTGGTGATATTACCTTGCTTGCTCAAGC GCTTGGTAAGGTCAATGGTATGGCGTGGGGCGTGGCAATGGGCGATTTTGCTGCCTTGATTCAAGCCGTGTCGAGTGATA CCAAATCAAATGTTCTTGCTACACCATCTATCACTACGCTTGATAACCAAGAAGCCTCATTTATCGTAGGTGATGAAGTC CCTATTTTAACCGGTAGTCAAAATTCTAGTAACGGTAACAGCAATCCATTCCAAACGGTTGAGCGTAAGGAAGTGGGCGT AAAGCTTAAAGTTGTTCCTCAAATTAACGAAGGAAGCTCGGTTAAGCTGACAATCGAGCAGGAAGTTTCAGGTATTAACG GTAAGACTGGCGTCGATGTAACCTTTGCTACTCGTCGTTTAACCACAACGGTAATGGCTGATTCAGGCCAAATCGTGGTA CTCGGTGGTTTGATTAAAGAAGAGGTGCAAGAGTCAGTACAAAAAGTCCCGTTCTTGGGTGATATCCCGATCATTGGCCA CCTATTTAAGTCCTCTTCTAGCGGTAAGAAAAAAACCAACTTGATGGTATTTATCAAGCCAACGATTATCCGCGACGGTA TGACCATGGAAGGCATCGCAGGACGTAAGTATAATTACTTCCGAGCGCTGCAACTCGAGCAGCAGGAACGCGGCGTTAAC TTAATGCCAAATACCGATGTGCCGATCCTCGAAGAGTGGAATCAAGCTGATTATCTGCCTCCTGAAGTCAACGACGTGCT GAACCGTTACAAAGAAGGTAAAGGTTTAGACACAAAGATGCGTGAAACCGATCCGGCGCTAAAGTCTATCTCGAATAGCA AAGATGCCGATAAGCAAGGCACTGATACAGATAAAGAAACTTCTGATGAGTGA Protein sequence : MNNKRIRRRLIAGMVMGASLLAPQLAWSEQYAANFKGTDIQEFINIVGKNLNRTIIVDPTVRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAVVEMDNNIIKVIKDKDAKTASIRVADDDAPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMISGRAAVVNKLVEIVRRVDKQGDTAVEVVKLEYASAGEIVRIIDTLYRSTANQAQMPGQAPKVVADERTNA VVVSGDEKSRERVVKLIKNLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAEQLVDDKGTSQGGGSKRRNEINIMAHNDT NALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVGEGDDVGFGVQWATEAGGGTQFNNLGPTIGEIGAGVWQAQGE EGSTVCNDGTCTENPDTRGDITLLAQALGKVNGMAWGVAMGDFAALIQAVSSDTKSNVLATPSITTLDNQEASFIVGDEV PILTGSQNSSNGNSNPFQTVERKEVGVKLKVVPQINEGSSVKLTIEQEVSGINGKTGVDVTFATRRLTTTVMADSGQIVV LGGLIKEEVQESVQKVPFLGDIPIIGHLFKSSSSGKKKTNLMVFIKPTIIRDGMTMEGIAGRKYNYFRALQLEQQERGVN LMPNTDVPILEEWNQADYLPPEVNDVLNRYKEGKGLDTKMRETDPALKSISNSKDADKQGTDTDKETSDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-145 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-152 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spea_0144 | YP_001500008.1 | general secretion pathway protein D | VFG2047 | Protein | 5e-144 | 52 |
