Gene Information

Name : Spea_1418 (Spea_1418)
Accession : YP_001501278.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1722866 - 1724032 bp
Length : 1167 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: she:Shewmr4_1330 UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGAAAATTGCTATAGCAGGGACAGGCTATGTTGGTCTGTCAAACGCGGTATTGTTAGCACAAAAGAACACCGTAATGGC
TGTTGATATTGTTGCTGAAAAAGTGGAGATGATTAACCTAGGTCAATCACCTATAGCAGATGTAGAGATAGAAGATTACC
TACAAAATCATAAGCTAAATTTAACTGCAACGCTTGATAAGCAATTAGCCTATCAAGATGCAGATTATGTGGTTATTGCC
ACACCGACAGATTACGACACTGAATCAAATTATTTTAATACATCGTCGGTTGAAGCCGTTATTCAAGATGTGTTAGCTAT
TAATCCAAATGCAGTTATGGTGATTAAGTCGACTGTACCAGTCGGTTATACGGAGTCGGTGAAACAAAAGTTCGATACTC
AAAATATTATTTTCTCACCTGAGTTTTTACGGGAAGGCCGAGCGCTTTACGATAACTTGCATCCATCGCGTATTATCATT
GGTGAGCGCTCTGATCGCGCTGAAGTGTTTGCTAACTTACTTGCAAGTGCGGCGATTAAAGAAAATATCGATATTCTTTT
TACTGACTCGACCGAAGCCGAAGCGGTTAAGCTTTTTTCGAATACCTACCTTGCAATGCGAGTCGCCTACTTTAATGAGT
TAGACAGTTATGCCGAGTCTCACGGTTTGGATTCACGCCAAATTATTGAAGGCGTTGGTCTAGACCCTCGTATTGGTAGC
CATTATAACAATCCATCATTTGGCTATGGTGGCTATTGCCTACCAAAAGACACTAAACAGCTTCGTGCAAACTATGCGGA
CGTACCGAATAGTCTTATTAGCGCGATTGTTGATGCTAACTCTACCCGTAAAGATTTTATTGCAGATTCTATTATTAATA
AGCAACCGAAAGTTGTTGGTATCTACCGTTTAATCATGAAGTCGGGTTCAGATAACTTCCGTGCATCTTCTATTCAGGGC
ATTATGAAGCGCATTAAAGCTAAGGGTATTGAGGTTGTAGTATTTGAGCCCGTACTTAACGAGCCTGAGTTCTTTAACTC
TCGAGTGATGCAAGATCTGAATGAATTTAAACAGATCTCAGATGTCATAGTATCAAACCGTATGGTTGACGAGCTGGCCG
ATGTCGCGGCTAAAGTTTATACCCGCGACTTGTTTGGTTCGGATTAA

Protein sequence : 
MKIAIAGTGYVGLSNAVLLAQKNTVMAVDIVAEKVEMINLGQSPIADVEIEDYLQNHKLNLTATLDKQLAYQDADYVVIA
TPTDYDTESNYFNTSSVEAVIQDVLAINPNAVMVIKSTVPVGYTESVKQKFDTQNIIFSPEFLREGRALYDNLHPSRIII
GERSDRAEVFANLLASAAIKENIDILFTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAESHGLDSRQIIEGVGLDPRIGS
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSLISAIVDANSTRKDFIADSIINKQPKVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGIEVVVFEPVLNEPEFFNSRVMQDLNEFKQISDVIVSNRMVDELADVAAKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-95 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_1418 YP_001501278.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 5e-102 56