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Name : Spea_1260 (Spea_1260) Accession : YP_001501122.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Virulence Product : phage transcriptional regulator AlpA Function : - COG functional category : K : Transcription COG ID : COG3311 EC number : - Position : 1530827 - 1531030 bp Length : 204 bp Strand : + Note : PFAM: Prophage CP4-57 regulatory; KEGG: shm:Shewmr7_1777 phage transcriptional regulator, AlpA DNA sequence : ATGAAACTAATCAGACTGAAAGACGTAATCGCATGTACAGGCTTAGCACGGTCAACAATCTATAAGTACATAGAAGAAGG AATATTTCCTAAGTCAGTATCTTTAGGTGACCGCGCTGTAGCGTGGGTAGAAAATGAAGTGCAAGAATGGATATTGGAGC GGATTGAAGAACGTGACTTACGGAATGGAAAGGTTAGTGAATGA Protein sequence : MKLIRLKDVIACTGLARSTIYKYIEEGIFPKSVSLGDRAVAWVENEVQEWILERIEERDLRNGKVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0497 | NP_230151.1 | transcriptional regulator | Not tested | VSP-2 | Protein | 2e-13 | 60 |
| VPI2_0041 | ACA01856.1 | predicted transcriptional regulator | Not tested | VPI-2 | Protein | 2e-14 | 59 |
| VC1809 | NP_231443.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 2e-14 | 57 |
| VC0395_A1406 | YP_001217349.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 2e-14 | 57 |
| VPI2_0033 | AAX20900.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 2e-11 | 55 |
| VC1785 | NP_231420.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 3e-11 | 55 |
| VC0395_A1382 | YP_001217325.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 3e-11 | 55 |
| unnamed | CAB46594.1 | DNA-binding protein | Not tested | HPI | Protein | 2e-10 | 48 |
| unnamed | CAA21398.1 | - | Not tested | HPI | Protein | 3e-10 | 48 |
| PMI2608 | YP_002152324.1 | prophage regulatory protein | Not tested | Not named | Protein | 3e-08 | 47 |
| ORF SG104 | AAN62325.1 | phage-related protein | Not tested | PAGI-3(SG) | Protein | 4e-08 | 44 |
| unnamed | CAD33739.1 | hypothetical protein | Not tested | PAI I 536 | Protein | 3e-06 | 42 |
| c5192 | NP_757040.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 5e-06 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spea_1260 | YP_001501122.1 | phage transcriptional regulator AlpA | VFG1141 | Protein | 6e-15 | 57 |
| Spea_1260 | YP_001501122.1 | phage transcriptional regulator AlpA | VFG1118 | Protein | 9e-12 | 55 |
| Spea_1260 | YP_001501122.1 | phage transcriptional regulator AlpA | VFG1480 | Protein | 1e-06 | 42 |
