Gene Information

Name : Spea_1257 (Spea_1257)
Accession : YP_001501119.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1529279 - 1529620 bp
Length : 342 bp
Strand : -
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: shn:Shewana3_1802 YagBYeeUYfjZ family protein

DNA sequence :
ATGACAACGATTCAACCATCTATGCCCTATCAATGGGGTTTACAGCGTAATATTACGCCGCGATTTGGTGCGCGGCTTAT
TCTGCAAGGCAGTCGCTTAGACTTCCTGTGGGATCGCTCAGGCTTTGTCGGCAGCTTTCCCCCAGCGCAAGGTCAGCTAC
TCAACGACGCCTTCTCAGAGATCATTAAGCAACTTGAGAACCAAGTATCACTGGGTCACCTCGATGCGCGTCAGCAACGC
AGCATAACCTTACAGCACGCTGGCTTTACCTGTGAGGCCGATACACTCGGTAGTCACGGATATCTCTATATTGCGATCTA
TCCAACCACAGCTAACCATTAA

Protein sequence :
MTTIQPSMPYQWGLQRNITPRFGARLILQGSRLDFLWDRSGFVGSFPPAQGQLLNDAFSEIIKQLENQVSLGHLDARQQR
SITLQHAGFTCEADTLGSHGYLYIAIYPTTANH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 9e-21 50
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 9e-21 50
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-20 50
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-20 50
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-19 50
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 6e-21 50
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 3e-20 50
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 5e-21 50
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 3e-20 49
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 3e-20 49
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-20 49
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 3e-20 49
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-20 49
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 8e-20 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_1257 YP_001501119.1 hypothetical protein VFG0662 Protein 3e-21 50
Spea_1257 YP_001501119.1 hypothetical protein VFG1068 Protein 1e-19 50
Spea_1257 YP_001501119.1 hypothetical protein VFG1681 Protein 1e-20 49
Spea_1257 YP_001501119.1 hypothetical protein VFG1619 Protein 1e-20 49