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Name : clpB (RMA_0063) Accession : YP_001498924.1 Strain : Rickettsia massiliae MTU5 Genome accession: NC_009900 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 53007 - 55589 bp Length : 2583 bp Strand : + Note : - DNA sequence : ATTTATATGAATATTGATAAATTTACTGCACATGCTAAATCAGTGATAGCTAGTAGCCAATCACTTGCTGCTAAAAATGA TCATCAGCAAATATTACCTTTGCATTTATTATCTAGTCTTTTAAGTGAAGAAACAGGTATAATTCAAACCCTTATTAATA ATACCGGCGGTAATATAAACTTATTAAAAGATCAAGTTCAGCTAGAACTAAATAAAATCCCAAAAATTCAGGTTGAGGGA GGGGGGCAAGTTTATTCTTCTGCTGAAGCTCTTAAAGTTTTAGAAAAAGCTAGTCGCATTGCTAAAGACAGTGGGGATAA CTTTGTAACCATAGAGCGTATATTTGAAGCATTAACTTATGATAATACTATAGCCGGTAAAATTTTAACGAATAATGGAA TTAATAATAAAAAAATAGCAGCAGCTATTTTACAGCTTCGTAAAGGCAAAAAAGCAGATACCGAATCGGCAGAAAATAGT TACGATGCTCTAAAGAAATACGGCAGAGACGTAACAGAGTTTGCCGAAAGCGGTAAGCTTGACCCGATAATCGGGCGTGA TGAAGAAATAAGAAGAACGGTGCAGGTACTATCACGACGTATGAAAAATAATCCTGTATTGATCGGTGAACCTGGAGTCG GTAAAACTGCTATAATAGAGGGGCTTGCACAACGAATATTTAGTAAGGACGTACCTGAATCGCTTATTAATTGCCGTATT ATTGAGCTGGATATGGGAGCTTTAATAGCGGGAGCTAAATATCGAGGCGAATTTGAAGAGCGTCTTAAAGCAGTGCTTAG CGAAATCAAAGAATCAAGCGGTGAAATTATTTTATTTATCGATGAATTGCATCTATTAGTCGGTACGGGAAAAACCGACG GTGCTATGGATGCCTCGAATTTACTAAAGCCGATGCTTGCTCGTGGTGAGCTGCATTGTATCGGTGCTACTACTCTAGAG GAATATCGTAAATATATCGAGAAAGATGTGGCACTTGCTCGTCGTTTTCAGCCTGTTTACGTGAGTGAGCCGACGGTTGA GGATACTATATCAATACTTAGAGGAATTAAAGAAAAATATGAGCTGCATCATGCAGTGCGAATTTCCGATAGTGCAATAG TTGCAGCAGCGATGTTATCAAACCGTTATATTACCGATCGTTATTTACCTGATAAAGCTATTGATTTGATTGATGAAGCT TGTAGCCGTATGAAAATAGAGCTATCAAGTAAACCAGAAGAGCTTGATGAGCTGGACCGTCGTATTATTCAGATAAAAAT AGAGCTTGCAGCACTTAAAAAAGAAAATGACGAGCATTCTAAAAAGAAAATAGAGCATTTAACTACAGAATTAGAAAAAT TAGAGTCTAAATCCTATGATATGGGAGCTAAATGGCAAGCTGAAAAGTCTAAACTACAGCAAACACAAAAGCTCAAAGAA GAACTAGACCGTAGCCGAAACGAGCTTGAACGTGCTGAACGTGATGCTAATCTCGCTAAAGCTAGTGAGCTAAAATACGG AATTATACCTGAGATTATGAAAAAGATTCAGGAAGCCGAAAGTATGGATAATAAAGGGCTGTTAAAAGAAATTGTATCGG AAAGCGATATAGCAAGTATTATCTCACGTATTACTGGTATTCCAATTGATACGATGCTATCAAGTGAACGTGAGCGTCTG CTTGTGATGGAGCAGAAATTACGAGAATCGGTAATAGGGCAGGATGAGGCAATTAAAGGTGTTAGTGATGCGGTAAGAAG ATCACGTGCAGGGATTCAAGATATTAACCGCCCGCTTGGTTCGTTCTTATTCTTAGGACCGACCGGAGTCGGTAAAACCG AGCTTACCAAAGCCTTAGCTGGTTTTCTTTTTGATGACCGTAATGCAATACTTCGTATAGATATGTCGGAATATATGGAG AAGCACGCTATTTCTCGCCTGATAGGAGCTCCTCCCGGCTATATCGGATATGATCAAGGCGGGGTGTTGACGGAGGCAGT AAGACGCCGTCCTTATCAGGTAATATTATTTGATGAGGTTGAAAAAGCCCATCCCGACATATTTAATATTATGCTGCAAA TACTTGATGAGGGAAGATTAACAGATAGTCAAGGTATAACGGTTGATTTTAAGAATACTATAATAGTTTTAACGTCTAAT TTAGGTGCTGAGATACTCGTTAATCAGAAAGAGGACGAAGATACATATAAAGTAAAGGATGAGGTTATGGAATATGTAAA AGCAGTATTTAAACCTGAGTTTTTAAACAGACTAGACGAGATTATATTATTCCATCGCCTAAATCGTAATAATATTCATG ATATAGTTAAGATACAGCTTGAAAGCTTAAGGAAAATTTTACTAGCACAAAATATTATTCTTGAATTTGATGAATCTGTC TTAAATTATTTAGCCGAAAAAGGTTATGATCCAAGCTTTGGAGCAAGACCCTTAAAACGCCTTATCCAGCGGGAAATACA AAATAATTTAGCCAAAATGATTTTAGCAGGCGAAATAAGTAGCGGTAAAACGGTTAAAATAAATGCAAAGGATAATAAAG AATTGAAGGTAACAATGAGTTGA Protein sequence : MYMNIDKFTAHAKSVIASSQSLAAKNDHQQILPLHLLSSLLSEETGIIQTLINNTGGNINLLKDQVQLELNKIPKIQVEG GGQVYSSAEALKVLEKASRIAKDSGDNFVTIERIFEALTYDNTIAGKILTNNGINNKKIAAAILQLRKGKKADTESAENS YDALKKYGRDVTEFAESGKLDPIIGRDEEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPESLINCRI IELDMGALIAGAKYRGEFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGATTLE EYRKYIEKDVALARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAAMLSNRYITDRYLPDKAIDLIDEA CSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKIEHLTTELEKLESKSYDMGAKWQAEKSKLQQTQKLKE ELDRSRNELERAERDANLAKASELKYGIIPEIMKKIQEAESMDNKGLLKEIVSESDIASIISRITGIPIDTMLSSERERL LVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYME KHAISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSN LGAEILVNQKEDEDTYKVKDEVMEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLRKILLAQNIILEFDESV LNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGKTVKINAKDNKELKVTMS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-159 | 48 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-101 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 9e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001498924.1 | chaperone ClpB | VFG0079 | Protein | 9e-164 | 47 |
| clpB | YP_001498924.1 | chaperone ClpB | VFG2084 | Protein | 5e-104 | 41 |
