|
Name : ssb (RMA_1320) Accession : YP_001499809.1 Strain : Rickettsia massiliae MTU5 Genome accession: NC_009900 Putative virulence/resistance : Unknown Product : single-stranded DNA-binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0629 EC number : - Position : 1292930 - 1293388 bp Length : 459 bp Strand : + Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA DNA sequence : ATGGCAGGTAGTTTAAATAAAGTAATATTAATAGGTAATGTAGGGCGTGATCCGGAAGTGAGAACTACGGGCGAAGGGAA AAAAATCATTAATCTTTCCTTAGCAACAACCGAAACTTGGAAAGATCGCATTACCAGCGAACGAAAAGAACGAACTGAAT GGCATAGAGTAGTGATATTTAGTGACGGGTTAGTATCTGTTGTAGAACGCTATGTCACAAAAGGTAGCAAATTATACATT GAAGGTTCATTGCAAACCCGTAAGTGGAATGATAATTCAGGTCAAGAAAAATATACCACGGAAGTTGTGTTACAAAACTT TAATTCACAATTAATATTATTAGATAGTAAAAACTCTAATAATCATACTCAAGATTCAGGACATAGCGAATATAAACATC CTGAAACTAAAAATCATTCCTTTGACCATAGCGACTTAGACGACGAAATACCGTTTTAA Protein sequence : MAGSLNKVILIGNVGRDPEVRTTGEGKKIINLSLATTETWKDRITSERKERTEWHRVVIFSDGLVSVVERYVTKGSKLYI EGSLQTRKWNDNSGQEKYTTEVVLQNFNSQLILLDSKNSNNHTQDSGHSEYKHPETKNHSFDHSDLDDEIPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssB | NP_458627.1 | single strand binding protein | Not tested | SPI-7 | Protein | 4e-28 | 45 |
| ssb | NP_807839.1 | single-stranded DNA-binding protein | Not tested | SPI-7 | Protein | 4e-28 | 45 |
| ssb | AAF14810.1 | single strand binding protein | Not tested | SPI-7 | Protein | 3e-28 | 45 |
| ssb1 | YP_005176252.1 | single-stranded DNA-binding protein | Not tested | ICEPmu1 | Protein | 1e-26 | 43 |
