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Name : rph (RMA_1006) Accession : YP_001499600.1 Strain : Rickettsia massiliae MTU5 Genome accession: NC_009900 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 1004948 - 1005700 bp Length : 753 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATTTATTTTTACTTATGGAGTACAAATTGTATTATGAGACAGTCAGGAAGAAAAAGCAACCAATTACGTCCTATTTCATT AGAATTATCCCCGCTTATTAATGCGGAAGGTTCATGTCTTATTAAAATAGGTAATACACATGTCATGTGTAGTGCTACTT GTGAAACTACCGTACCGCCATTCTTGAGGGGACAAAATCAAGGCTGGATTACTGCCGAGTACGGTATGCTTCCCGGTTCT ACATCACAGCGTATTAAAAGAGAAGCGGCACTCGGAAAACAAGGCGGAAGAACGCAAGAGATACAGCGTTTAATAGGTAG GGCGATGCGATGTGTAATTGATGTGAAGAAACTCGGCGAGAGGCAAATTATCATAGATTGTGATGTTATTAATGCTGACG GCGGTACTAGAACTGCAGCAATAACAGGGAGCTACGTAGCATTGCACCTAGCGATTAGGTCCTTGATGAAAAAGAGAGTT TTAAAGGTGAACCCGTTAATTAGTCAAATTGCAGCTATTTCTTGCGGTATATATAAAGGTGAGGCGATACTAGATTTGGA TTATTTAGAAGATAGTGATGCGGACGTGGATAGTAATTTTGTGTTTGCAGGTAACGGTAATTTAATCGAAGTACAAGGCA CGGCAGAGAAAAATCCTTTTTCCGAAGGGCAGTTTTTAGCAATGTTAAAACTTGCTAAAGGCGGAGCTGCGGAATTATTT AAACTACAAAATCAGGTACTGCTTGAGTCTTAG Protein sequence : MYFYLWSTNCIMRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWITAEYGMLPGS TSQRIKREAALGKQGGRTQEIQRLIGRAMRCVIDVKKLGERQIIIDCDVINADGGTRTAAITGSYVALHLAIRSLMKKRV LKVNPLISQIAAISCGIYKGEAILDLDYLEDSDADVDSNFVFAGNGNLIEVQGTAEKNPFSEGQFLAMLKLAKGGAAELF KLQNQVLLES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-43 | 51 |
