Gene Information

Name : RMA_0746 (RMA_0746)
Accession : YP_001499436.1
Strain : Rickettsia massiliae MTU5
Genome accession: NC_009900
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 742738 - 743607 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence :
ATCCCGATAAGGTACGCGTGGATAAAGGAGAATGAAGGTAATTTTTCCATTGCTGCTATGTGTAAATTTATGAAAGTATC
ACGTAGTGGTTATTATGAATGGCTAAATAATCCTGGATGTAATAGGGATCGAGAAGATAATGAATTAACAAACAGAATTA
AAATTATCTTTAAAGAAGGTAGAGGTAATTATGGAACTAGACCTATTAAAAAGGAGCTATCTAGGCAAAGTATAATTGTT
AGTAGGAGGCGTATTGCAAGACTAATGAAAGAGGCTAGTTTAATATGTAAAACTAAGCGTAAATTTAAAGCCACTACTGA
CTCTAATCATAACAAGCAAATTGCTCCTAATTTATTGGATAGAAAATTTACAGTTCCTGATGCTAATTGTTATTGGGTTG
GAGATATAACCTATGTACCAACTAGTGAAGGTTGGCTATATTTAGCAACAGTTATTGATCTATTTTCTAGAAAAATTATA
GGATGGTCTATGAATAATAATATGAAGGCTGATTTGGTTAATAATGCTTTATTAATGGCAATATGGCAACGTAAACCACC
AAAAGGACTTATTTGGCACACCGATAGAGGTAGCCAATATTGTTCTGATAGTCATTTAAAAATTATAAAACAACATGGTA
TCAAACAGAGTATGAGTCGTAAAGGTAATTGTTGGGATAACGCTGTTGCTGAAAGTTTCTTTCATACTATAAAAACAGAA
TTAGTGTATCAACATAAATTTAAAACTAGGGAGGAAGCAAAACATACCATATTTGAATATATAGAGGTATTTTATAATCG
TATAAGAATGCATTCTGCTAACGATTATCTATCACCAGTAAAATACGAAGAAATACAAAAATGTGCATAA

Protein sequence :
MPIRYAWIKENEGNFSIAAMCKFMKVSRSGYYEWLNNPGCNRDREDNELTNRIKIIFKEGRGNYGTRPIKKELSRQSIIV
SRRRIARLMKEASLICKTKRKFKATTDSNHNKQIAPNLLDRKFTVPDANCYWVGDITYVPTSEGWLYLATVIDLFSRKII
GWSMNNNMKADLVNNALLMAIWQRKPPKGLIWHTDRGSQYCSDSHLKIIKQHGIKQSMSRKGNCWDNAVAESFFHTIKTE
LVYQHKFKTREEAKHTIFEYIEVFYNRIRMHSANDYLSPVKYEEIQKCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-54 50
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 7e-55 50
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 7e-55 50
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-54 50
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-54 49
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-54 49
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-54 49
unnamed AAF09022.1 unknown Not tested SHI-O Protein 8e-55 49
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-54 48
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 8e-46 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-46 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-46 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-48 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-47 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-47 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RMA_0746 YP_001499436.1 transposase VFG1706 Protein 6e-55 50
RMA_0746 YP_001499436.1 transposase VFG1631 Protein 1e-48 42