Gene Information

Name : rph (A1C_04950)
Accession : YP_001493752.1
Strain : Rickettsia akari Hartford
Genome accession: NC_009881
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 894478 - 895197 bp
Length : 720 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGACAGTCAGGAAGAAAAAGCAACCAATTACGTCCTATTTCATTAGAATTATCACCGCTTATTAATACGGAAGGTTC
GTGCATTATTAAAATCGGTAATACGCATGTCATGTGTAGTGCTACTTGCGAAACTACCGTACCACCGTTTTTACGAGGGC
AAAATCAAGGTTGGGTTACCGCTGAGTACGGCATGCTCCCAGGCTCTACATCCCAGCGTATTAAAAGAGAAGCAGCACAA
GGGAAGCAAGGCGGAAGAACCCAAGAAATACAGCGTTTGATAGGAAGAAGCATGCGATGTGTAATGGACTTGAAGAAACT
GGGTGAGAGGCAGATTATTATAGATTGTGACGTTATTAATGCCGATGGTGGTACTAGAACGGCATCGATAACAGGAAGCT
ATGTAGCATTACACCTAGCTATTAGATCATTGATGAAAAAGAGAATTTTAAAGGTCAATCCCTTAATTAGTCAAATTGCA
GCTGTTTCTTGCGGTATATATAAAGGTGAGGCGATACTAGATTTGGATTATTTAGAAGATAGTGATGCTGAAGTGGATAG
TAATTTTGTATTTGCAGGTAACGGTAATTTAATCGAAGTACAAGGCACGGCAGAGCAAGAACCTTTTTCCGAAGAGCAGT
TTATAGAAATGTTAAAACTTGCTAAATGCGGTGCAGCAGAATTATTTAAACTACAAAATCAAGTGCTGCTTGGGACTTAG

Protein sequence :
MRQSGRKSNQLRPISLELSPLINTEGSCIIKIGNTHVMCSATCETTVPPFLRGQNQGWVTAEYGMLPGSTSQRIKREAAQ
GKQGGRTQEIQRLIGRSMRCVMDLKKLGERQIIIDCDVINADGGTRTASITGSYVALHLAIRSLMKKRILKVNPLISQIA
AVSCGIYKGEAILDLDYLEDSDAEVDSNFVFAGNGNLIEVQGTAEQEPFSEEQFIEMLKLAKCGAAELFKLQNQVLLGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-48 49