|
Name : A1C_06075 (A1C_06075) Accession : YP_001493956.1 Strain : Rickettsia akari Hartford Genome accession: NC_009881 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1085018 - 1086295 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAAGTATCAAATGGATTAGAGAAAATCAAGAATTATTCGATGAAAAGCTTAGCAAAAGATTTATTGAACCTATGTC TAGTAAAATTGCTATGCTCGACGGAGAGAAAAGAAAAATTACGAGTTTAATTCAAGAATTTCAGCATGCACGTAAGGTAA AATCAAAGATTTTAGGTAATATGGCTTCTAAAAGCGGCGAAGAGTTTGAAGCGATACAAAGAGATGTCAAACATATAAAT GAGAAGTTGGAAGAACTTGAACAGGATCTAAATAATAATAACGAATTAAATGAACTATTAAATATGCTTCCTAATATTCC GGACGAAGAAGTACCTTACGGAATGGATGAAAGTATGAATAAATTAGTTCGTACTTACGGAGAGACAAATCCAAATGCTT TAAATAAACAGCATTTTGAACTAGGTACAAAATTAAATTTAATGGATTTTGAACAAACTGCTAAAATTTCTGGAGCTAGA TTTGTAACGTTAAAAGGTGATTTAGCAAAGTTAGAACGTGCTTTAATTAATTTTATGATTGATGTTCATACTAAAGAGTT TAACTTCTTTGAGATGTCACCTCCAGTATTAGTTCGAGATAATGCTATGTATAATTCAGGACAACTACCTAAATTTGCTG AAGAGTCTTTTGCAACAACAAATGGTTACAGACTAATTCCAACCGCAGAAGTATTTTTAGTAAATATAGTCGCCGATACT ATAATACCAAGGGAAAAATTGCCGATGCGTTATGTTGCTTACACCCCGTGCTTTAGATCAGAAGCAGGTAGTAGCGGTAG AGATACAAGAGGTATGATCAGATTACATCAGTTCGGTAAAGTTGAGCTAGTATCTATTACTACCCCGGAAGAATCAAAAC ATGAGCATGAATATATAACTAATTCATCAGAGACTATTTTACAAAAACTGAATCTTCCTTATCGTGTTATGTTACTTTGC ACCGGAGATATGGGATTTGCGGCAAAAAAAACCTATGATATAGAGGTGTGGCTTCCGGGACAAAAGCAATATCGTGAAAT TGCTAGCTGTTCTAATTGTGGAGATTTTCAAGCACGTAGAATGAAAGCAAGATATAAGGAATTCGGCAGTAACGAAACTA CCTTAGTCCATACTTTAAATGCTTCAGGATTACCTATCGGAAGAACTATGGTTGCAATACTTGAAAATTATCAGAATGAA GATGGCTCAATAACTATACCTGATGTCTTGATAAATTACATGGGAGGGTTACAAAAAATCACTACACATGGTGAATAA Protein sequence : MLSIKWIRENQELFDEKLSKRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGNMASKSGEEFEAIQRDVKHIN EKLEELEQDLNNNNELNELLNMLPNIPDEEVPYGMDESMNKLVRTYGETNPNALNKQHFELGTKLNLMDFEQTAKISGAR FVTLKGDLAKLERALINFMIDVHTKEFNFFEMSPPVLVRDNAMYNSGQLPKFAEESFATTNGYRLIPTAEVFLVNIVADT IIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKHEHEYITNSSETILQKLNLPYRVMLLC TGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNE DGSITIPDVLINYMGGLQKITTHGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-78 | 46 |
