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Name : A1E_05000 (A1E_05000) Accession : YP_001492701.1 Strain : Rickettsia canadensis McKiel Genome accession: NC_009879 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1019334 - 1020611 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAAATATCAAATGGATTAGAGAAAACCAAGAATTGTTTGATGAAAAGCTTAGCCAAAGATTTATTGAACCTATGTC TAGTAAAATCGCTATGCTCGACGAAGAGAAAAGAAAAATTACGAGTTTAATTCAAGAATTTCAGCATGCACGTAGGGTGA AATCGAAGATTTTAGGTAATATGACCTCTAAAAGCAGTGAAGAGTTTGAAGGTTTACAAAGAGATGTCAAACATATAAAT GAGAAGTTGGAAGAACTTGAAAAGGATCTAAATAACAATAACGAATTAAATGAGCTATTAAATATGCTTCCTAATATTCC GGACGACGAAGTACCTTACGGAATTGATGAAAGTATGAATAAATTAGTTCGTACTTACGGAGAGATAAATCCAAATGCTT TAAATAAGCAGCATTTTGAACTAGGCACAAAATTAAATTTAATGGATTTTGAACAAACTACTAAAATTTCAGGAGCTAGA TTTGTAACATTAAAAGGCGATTTAGCAAAGCTAGAACGTGCTTTAATTAACTTTATGATTGATGTTCATACTAAAGAGTT TGACTTCTTTGAGATATCACCTCCAGTATTAGTTCGAGATAATGCTATGTATAATGCAGGACAACTACCTAAATTTACTG AAGAGTCTTTTGCAACAACAAAGGGTTACAGACTAATTCCAACCGCAGAAGTATCTTTAGTCAATATAGTCGCTGATACT ATTATATCAAGAGAAAAATTACCTATGCGTTACGTTGCTTACACCCAGTGCTTTAGATCAGAAGCAGGTAGTAGCGGTAG AGATACAAGAGGTATGATTAGATTACATCAATTCGGTAAAGTAGAGCTTGTATCTATTACTACTCCAGAAGAGTCACAAA ATGAACATGAATATATAACTAATGCATCAGAGACTATTTTACAAAAACTTAATCTACCTTATCGTATTATGTTACTTTGC ACTGGAGATATGGGATTTGCAGCAAAAAAAACCTATGATATAGAAGTATGGCTTCCGGGACAAAAGCAATATCGTGAAAT TGCGAGCTGTTCTAATTGTGGAGATTTTCAAGCACGTAGAATGAAAGCAAGATATAAAGAATTCGGCAGTAACGATACTA CCTTAGTTCATACTTTAAATGCTTCAGGATTACCTATCGGAAGAACTATGGTTGCAATATTAGAAAGTTATCAGAACGAA GATGGATCAATAACTATACCTGATGTCTTGATAAATTACATGGGAGGGTTACAAAAAATCACTACATATAGTGAATAA Protein sequence : MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDEEKRKITSLIQEFQHARRVKSKILGNMTSKSSEEFEGLQRDVKHIN EKLEELEKDLNNNNELNELLNMLPNIPDDEVPYGIDESMNKLVRTYGEINPNALNKQHFELGTKLNLMDFEQTTKISGAR FVTLKGDLAKLERALINFMIDVHTKEFDFFEISPPVLVRDNAMYNAGQLPKFTEESFATTKGYRLIPTAEVSLVNIVADT IISREKLPMRYVAYTQCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESQNEHEYITNASETILQKLNLPYRIMLLC TGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQARRMKARYKEFGSNDTTLVHTLNASGLPIGRTMVAILESYQNE DGSITIPDVLINYMGGLQKITTYSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-79 | 46 |
