Gene Information

Name : fliP (Abu_0995)
Accession : YP_001489924.1
Strain : Arcobacter butzleri RM4018
Genome accession: NC_009850
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1000190 - 1000915 bp
Length : 726 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :

TTGAGAATTATTTTTACTGTACTACTTTTTTCTATTTTTGCAAATGCAGCAGATGCACCAATGATAAATCTATCGGTTGC
TGCAATAGAACAACCAGTACAATTCGTAAGAACAATAAATATCGCAATTATTTTAGCACTATTAGTTTTAGCACCAACAC
TTTTACTGATGGTTACTTCTTTTACAAGACTTATTATTGTATTTTCACTTTTAAGACAAGCTATGGGATTACAACAAACT
CCACCTTCTCAAATAATAATCTCTTTATCTCTTATTTTAACTATTTTTATCATGGAACCTTATGCAAAAAAAGCTTGGGA
TGATGCAATAGTTCCATATATGGATGAAAAAATTGGTTATGAAGTAGCTTTTGATAAAGGTGTTGCACCTTTCAAAGAAT
TTATGATTAAAAATACAAGAGAAGCTGATTTAGCACTATTTTATAGAATAAAAAAAGAGCCAAATCCTAAAAATATAGAA
GCTGTTCCTCTTACTTTACTTATGCCAGCTTTTATTGTTAGTGAATTAAGAACTGCTTTTGAAATAGGTTTTTTAATCTT
TTTACCATTTTTAGTTATTGATATTATCGTTGCTTCAATTTTAATGAGTTTAGGTATGATGATGTTACCACCTGTTATGA
TATCCTTGCCTATTAAAATAATTTTCTTTATAGTCGTAGATGGATGGCAACTCATAATTGGAAATCTTGCACAATCATTT
AAATAA

Protein sequence :

MRIIFTVLLFSIFANAADAPMINLSVAAIEQPVQFVRTINIAIILALLVLAPTLLLMVTSFTRLIIVFSLLRQAMGLQQT
PPSQIIISLSLILTIFIMEPYAKKAWDDAIVPYMDEKIGYEVAFDKGVAPFKEFMIKNTREADLALFYRIKKEPNPKNIE
AVPLTLLMPAFIVSELRTAFEIGFLIFLPFLVIDIIVASILMSLGMMMLPPVMISLPIKIIFFIVVDGWQLIIGNLAQSF
K

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
escR	CAI43889.1	EscR protein	Virulence	LEE	Protein	3e-23	42
escR	AFO66317.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	2e-22	42
escR	NP_290283.1	type III secretion system protein	Virulence	LEE	Protein	4e-23	42
unnamed	AAL06354.1	EscR	Virulence	LEE	Protein	2e-23	42
escR	AFO66400.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	2e-22	42
escR	YP_003223490.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-23	42
escR	AAC38369.1	EscR	Virulence	LEE	Protein	2e-22	42
escR	YP_003232138.1	type III secretion system protein	Virulence	LEE	Protein	4e-23	42
escR	AAC31528.1	L0049	Virulence	LEE	Protein	3e-23	42
ECs4583	NP_312610.1	type III secretion system protein	Virulence	LEE	Protein	4e-23	42
escR	ACU09473.1	type III secretion system protein EscR	Virulence	LEE	Protein	3e-23	42
escR	AAK26700.1	EscR	Virulence	LEE	Protein	3e-23	42
escR	AAL57527.1	EscR	Virulence	LEE	Protein	3e-23	42
escR	CAC81847.1	EscR protein	Virulence	LEE II	Protein	3e-23	42
escR	YP_003236103.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-23	42
ssaR	CAA68199.1	secretion system apparatus, SsaR	Virulence	SPI-2	Protein	2e-25	41
yscR	NP_456109.1	putative type III secretion protein	Virulence	SPI-2	Protein	4e-25	41
yscR	NP_805090.1	type III secretion system protein	Virulence	SPI-2	Protein	4e-25	41
ssaR	YP_216427.1	type III secretion system protein	Virulence	SPI-2	Protein	2e-25	41
ssaR	NP_460384.1	type III secretion system protein	Virulence	SPI-2	Protein	2e-25	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG2494	Protein	5e-44	57
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG2338	Protein	6e-43	56
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG1259	Protein	4e-43	55
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG2016	Protein	1e-41	52
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG0827	Protein	2e-23	42
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG0715	Protein	1e-22	42
fliP	YP_001489924.1	flagellar biosynthesis protein FliP	VFG0519	Protein	9e-26	41