Gene Information

Name : Abu_0708 (Abu_0708)
Accession : YP_001489642.1
Strain : Arcobacter butzleri RM4018
Genome accession: NC_009850
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 719082 - 719789 bp
Length : 708 bp
Strand : +
Note : Pfam match to PF00005 ABC_tran, score 204.7, E-value 2E-058

DNA sequence : 
ATGATGGAAAATAGAAAAGTTATCATAGAGTTTAAAAAGATTGTAAAAACCTATGGTTCTGGTGATACTCAAACTCACGC
TTTAAATGGAGTAGATTTAAAAATATATGAAGGTGAATTTGTAGCAATAATGGGAGCTAGTGGAAGTGGAAAATCAACTT
CTATGAATATGATAGGTTGTTTAGATAAACCAACTAGCGGAGAGTATCTGTTTAATGGAATAAATGTAGAAAAACTAAAT
AGAAATCAAATGGCTTTGTTAAGAAGAAATTATTTAGGTTTTGTTTTTCAAGGCTTCAATCTTTTAGGAAGAACTTCTGC
TTTAGAAAATGTTGAACTTCCTTTGATTTATAGAAAAATTCCAGCAAAACAAAGAGAAATTTTAGCTACTGAAGCTTTAG
ATAAAGTAGGATTAGGAAGTGTTATAAAAAATACTCCAGCTGAACTTTCAGGTGGTCAACAACAACGTGTTGCAATAGCA
AGAGCAATAGTGACAAATCCTTTAGTTTTACTTGCAGATGAACCAACAGGAAATCTTGATAGTATAAAAAGTGTAGAGAT
TATGAATTTATTAAAACAATTAAATAAAGAGTCTAATATTACGGTTATTATGGTAACTCACGAAGAAGAAATGGCTGCTT
ATGCAGATAGAATAATATATTTTAGAGATGGGCATATAGAAGATAGTTTAAAAAAAGGATATAAATAA

Protein sequence : 
MMENRKVIIEFKKIVKTYGSGDTQTHALNGVDLKIYEGEFVAIMGASGSGKSTSMNMIGCLDKPTSGEYLFNGINVEKLN
RNQMALLRRNYLGFVFQGFNLLGRTSALENVELPLIYRKIPAKQREILATEALDKVGLGSVIKNTPAELSGGQQQRVAIA
RAIVTNPLVLLADEPTGNLDSIKSVEIMNLLKQLNKESNITVIMVTHEEEMAAYADRIIYFRDGHIEDSLKKGYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Abu_0708 YP_001489642.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-51 55
Abu_0708 YP_001489642.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-40 46
Abu_0708 YP_001489642.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-35 44
Abu_0708 YP_001489642.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-35 43
Abu_0708 YP_001489642.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Abu_0708 YP_001489642.1 ABC transporter ATP-binding protein VFG0869 Protein 4e-20 41