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Name : pglF (Abu_0696) Accession : YP_001489630.1 Strain : Arcobacter butzleri RM4018 Genome accession: NC_009850 Putative virulence/resistance : Virulence Product : sugar epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : 4.2.1.46 Position : 707921 - 709663 bp Length : 1743 bp Strand : + Note : Pfam match to PF02719 Polysacc_synt_2, score 584.2, E-value 1.1E-172 DNA sequence : ATGAATTATTTAAGAGACAAGAGATTTCTTGGAATATTAGTAACTATCGTTATATCTACATTTTCTCTTTATTTAGTTAG TTTTTTAATACATAAAGAACTCTCATTATTTACTTTGATTACTATAATTATAACTAGAATATTGTTTTCATTTTTACTTT TTGATGATTACAAACTCTCTTGGTCAAAAGCATCTACAAAAACAGGTTTGATGAAGATCATACTTGCATTAATAAGTTTT ATGATTTATATGCCTATCCTATATTATTTTTATCATATTTCTTTTAATCTTTTATTTATCGATTTGATTTTTTATACATT TATTATAAATATTTTAGTTTATGTATATAAATATTATCACTCTGTTGGAAAAAACAAAAAAACGAAAAGTTTAGTAATAT ATGGAGCAGGAAAAGCTGGACTTCAACTTCAAAGAGAGTTTTTAAATAGTGAATATAAACTTGTTTGTTTTATAGATGAT GATGAAATCTTGCACCATAGAAGTATTGATGGTATTTCTATATATTCAAAAGAAAAATATTGTAGTTTATTTGAAAATCA AAAATTTGATTTGATGATTATTGCTATGCCATCAGCTTCTCAAGAACAAATAAAAATAATTTATGAATTTATGCAAGATA AGTTTGAAAAAATAAAAATTTTGCCTTCGATGAATAATATTCTGAAAAAAGAAGAATTCACAAAACAACTTAAAGATATT GGCGTAGAAGATTTACTAGCACGTTATCCAAAAGATTTGGATAAAAAACAAATAGAAAACTTTATAAAAGACAAAATAGT TTTAATTACAGGTGCAGGTGGAAGTATAGGAAGTGAAATATCAAGACAGTGTAAAGTGTATGGAGCAAAACAGCTGATAC TTTTAGATCATAGTGAATTTAATCTTTATTCAATTTTAGAAGAATTAAAAGGTGAAAATGTAGTTCCTATTATGCAAAGT GTAAGAGATATAAAAGCTTTAGAGAGTACTTTTGAAAAATATAAACCACAAATAGTTATTCATGCAGCAGCTTATAAACA TGTGCCTTTGGTTGAGTACAATATCTTAGAAGGTATTACAAATAATATAATTGGAACAAAAAATTGTATAGATTTATCTA TAAAATATGGTGCTCAAAAGTTTGTTCTTATATCAACAGATAAAGCAGTTCGTCCAACAAATATTATGGGAACAACAAAA CGAATTTGTGAACTTTATGCTCAAAATGTAGAATCAAAAAATACAGAGATTGTAGCAGTTAGATTTGGAAATGTTCTAGG AAGTAGTGGAAGTGTTATTCCAAAATTTAAATCTCAAATTGAACAAGGTAAAAATATTACAGTAACTCATCCAGAAATTA CAAGATATTTTATGCTTATTCCTGAAGCTTGTGAACTTGTGCTTCAAGCTGCGAGTATTGGAAAAGGTGGAGAGATATTT ATTCTTGATATGGGAGAACCAATACGTATAGTTGATTTGGCTAAGAAAATGATTGAACTGAGTGGTAGAAATGACATCAA TATAGAGTTTTGTGGATTAAGACTTGGTGAAAAATTATATGAAGAATTATTAATAAATGATAGCGATCAAAAAACAAAAT ATGAATCAATCACAGTTGCAAATTCTACAAAATTTTATATAAAAGAACTAAATAAAAAAATAGAAGAATTATTAATTTGT GAAGATAAAGTAGCAAAATTAAAAGAGATTGTTCCAGAATTTGAGCATAGATTAAATAACTAA Protein sequence : MNYLRDKRFLGILVTIVISTFSLYLVSFLIHKELSLFTLITIIITRILFSFLLFDDYKLSWSKASTKTGLMKIILALISF MIYMPILYYFYHISFNLLFIDLIFYTFIINILVYVYKYYHSVGKNKKTKSLVIYGAGKAGLQLQREFLNSEYKLVCFIDD DEILHHRSIDGISIYSKEKYCSLFENQKFDLMIIAMPSASQEQIKIIYEFMQDKFEKIKILPSMNNILKKEEFTKQLKDI GVEDLLARYPKDLDKKQIENFIKDKIVLITGAGGSIGSEISRQCKVYGAKQLILLDHSEFNLYSILEELKGENVVPIMQS VRDIKALESTFEKYKPQIVIHAAAYKHVPLVEYNILEGITNNIIGTKNCIDLSIKYGAQKFVLISTDKAVRPTNIMGTTK RICELYAQNVESKNTEIVAVRFGNVLGSSGSVIPKFKSQIEQGKNITVTHPEITRYFMLIPEACELVLQAASIGKGGEIF ILDMGEPIRIVDLAKKMIELSGRNDINIEFCGLRLGEKLYEELLINDSDQKTKYESITVANSTKFYIKELNKKIEELLIC EDKVAKLKEIVPEFEHRLNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-75 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pglF | YP_001489630.1 | sugar epimerase/dehydratase | VFG1300 | Protein | 1e-72 | 44 |
