Gene Information

Name : ugd (Abu_0659)
Accession : YP_001489593.1
Strain : Arcobacter butzleri RM4018
Genome accession: NC_009850
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 668065 - 669231 bp
Length : 1167 bp
Strand : +
Note : Pfam matches to PF03721 UDPG_MGDP_dh_N, score 182.6, E-value 8.9E-052, and to PF00984 UDPG_MGDP_dh, score 132.5, E-value 1.1E-036, and to PF03720 UDPG_MGDP_dh_C, score 27, E-value 2.1E-006

DNA sequence :
ATGAAAATAGCAATAGCAGGAACAGGTTATGTAGGTTTATCAAATGGCTTACTTCTATCTCAATACAATGAAGTAATAGC
ACTTGATATAGTTCCACAAAAAGTTGAAATGCTAAATAATAAAATGTCACCAATAGAAGATAAAGAGATAGAAGAGTATC
TAAAAAAAGATCATATAAATTTTAAAGCAACTTTAGATAAAAATGAAGCTTATAAAGATGCTGATTTTATAATTATCGCA
ACACCAACTGATTATGATGAAAAGACTAACTATTTTAATACAAAATCTGTTGAAGCAGTTATAAAAGATGTACTTGAAAT
AAATCCAAATGCTACAATGGTTATCAAATCAACAGTGCCAGTTGGATATACAAAAGAAGTAAGAGAAAGATTTGAAACTT
CTAATATTATTTTTTCACCAGAATTTTTACGAGAGGGAAAAGCTTTATATGACAACTTATATCCAAGCAGAATAATCGTA
GGTGAACAATCAAAAAGAGCTGAAACTTTTGCAAAATTATTAGAGCAAGGTGCTATAAAAAAAGATATTCCAGTATTATT
TACAGATTCAACTGAAGCTGAAGCTATAAAACTATTTTCAAATACTTATCTTGCGATGAGAGTTGCATATTTTAATGAAC
TTGACTCTTATGCGTCTGCTCATAATCTTGATACAAAACAGATAATTGATGGTGTTGGACTTGATCCAAGAATAGGAACG
CATTATAACAATCCTAGTTTTGGATATGGTGGATATTGTTTGCCAAAAGATACAAAACAACTTTTAGCAAATTATAGTGA
AGTACCAAGTAATCTAATAGAAGCTATTGTAAAATCAAACTCTACAAGAAAAGATTTTATAGCAGATAGTATTATTAGAA
AAAATCCAAAAATAGTTGGTATTTATAGACTTGTGATGAAAACTGGAAGTGATAATTTTAGAAGTTCTGCAATACAAGGA
ATAATGAAAAGAATAAAAGCAAAAGGTATAGAAGTAGTAGTATATGAGCCAGTATTAAATGAAGATACATTTTTTAATTC
AAGAGTAATAAAAGATTTAAGTGAGTTTAAAAAGATATCGGATGTAATAGTAGCAAATAGACTAAGTGATATTTTAAAAG
ATGTACAAGACAAAGTTTATACTAGAGACATTTTTGGAAATGATTAA

Protein sequence :
MKIAIAGTGYVGLSNGLLLSQYNEVIALDIVPQKVEMLNNKMSPIEDKEIEEYLKKDHINFKATLDKNEAYKDADFIIIA
TPTDYDEKTNYFNTKSVEAVIKDVLEINPNATMVIKSTVPVGYTKEVRERFETSNIIFSPEFLREGKALYDNLYPSRIIV
GEQSKRAETFAKLLEQGAIKKDIPVLFTDSTEAEAIKLFSNTYLAMRVAYFNELDSYASAHNLDTKQIIDGVGLDPRIGT
HYNNPSFGYGGYCLPKDTKQLLANYSEVPSNLIEAIVKSNSTRKDFIADSIIRKNPKIVGIYRLVMKTGSDNFRSSAIQG
IMKRIKAKGIEVVVYEPVLNEDTFFNSRVIKDLSEFKKISDVIVANRLSDILKDVQDKVYTRDIFGND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-93 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_001489593.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 5e-108 57