Gene Information

Name : Abu_0499 (Abu_0499)
Accession : YP_001489443.1
Strain : Arcobacter butzleri RM4018
Genome accession: NC_009850
Putative virulence/resistance : Resistance
Product : sodium:solute symporter family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 508154 - 509821 bp
Length : 1668 bp
Strand : -
Note : Pfam match to PF00474 SSF, score 451.9, E-value 7.6E-133

DNA sequence :
ATGTTGAAAGTTTTAGCACTAATTTCTATCTTTGCAATATCGCTTTTTGCAGCGGGTGATGCAACTTTCGAGGGGAAAAG
AGATTTAAATATTCCTGCAATTATTATGTTTTTTGTATTTATTGCTGGAACTTTAGGAATTACTTATTGGGCAGCAAGAA
AAACTAAATCTGCTTCAGATTTTTATACAGCTGGTGGAGGAATAAGTGGTTTCCAAAATGGTTTAGCAATTGCAGGTGAT
TATATGTCTGCTGCTGCATTTTTAGGAGTATCTGGACTTATTTATATGAGTGGATATGATGGTGTTATTTATGCTGTTTC
GTTTTTAGTTGGTTGGCCTGTAATTTTATTTTTTATGGCTGAAAAATTAAGAAATTTAGGTAAATTTACTTTTGCAGATA
TCGCTGCTTATAGATTAGGTCAAAAAGAGATAAGAACTTTAGCGGCATTTGGTTCACTTTCTGTTGTTGTTTTATACTTA
ATCGCACAAATGGTAGGAGCAGGTAAACTTATCCAAATTTTATTTGGAATGGAATATGAATATGCTGTATTTATGGTTGG
AGCATTGATGATTATTTATGTAACATTTGGTGGAATGCTTGCTACTACTTGGGTACAAATTATCAAAGCTATTTTACTAT
TATCTGGTGTTTCGTTTATGGCCGTTATGATTTTATATCACTTCGACTTCTCTTTTGAGTCTTTAGCTGTTCAAGCTGTT
GAACATCATAAGAATGGTGAAGCTATTTTAAAACCAGGTGGATTTTTATCAGACCCAATTTCAGCAATTTCTTTAGGTAT
GGCTTTAATGCTTGGAACTGCTGGTCTTCCTCACGTTTTAATGAGATTTTTTACAGTTGGAAATGCAAAAGAAGCAAGAA
AATCTGTTGTTTATGCAACTGGTTTCGTAGCATATTTTTGGATTATTATTACTATTGTTGGATTTGGAGCAATTGCTTTT
TTAAATACAGCAGAAGGTGCTCAATATTTTGACGGAGCAAAAGCATATCTTGATGGTGGGAAATTATTTGGTGGAAGTAA
TATGGCTTCTGTTCACTTATCACATATGTTAGGAGGAAATGCTTTCTTAGGATTTATCTCTGCAGTTGCATTTGCTACTA
TTTTAGCGGTTGTTTCAGGTTTAACACTTGCAGGAGCAAGTGCTATTTCACATGATATTTATGCAAATGTTATAAATCCT
AATGCAACAGATGAACAAGTTGTAAAAATATCTAAAATCACAGTTATTATTGTAGGAATTGTTGGTGTTACTTTAGGTAT
CGCATTTGAATCACAAAATATTGCATATATGGTTGGTCTTGCTTTTGGTATTGCAGCAAGTGCTAATTTTCCTATTTTAT
TTTTATCAATTTATTGGAGCCAATTAACTACAAGAGGCGCATTTATTGGTGGATTTATGGGATTAATTACTGCTGTTGTA
CTTGTAATTTTGGGACCAAATGTTTGGGTTCAAATTTTAGGAAATGAAAAAGCAATATTTCCTTATGCACACCCTGCACT
ATTTTCTGTAACAGTAGCATTTGTTTCTATTTGGTTCTTCTCTAAAATTGATAACTCTGAAAAAGCTATAAAAGAAAGAG
CTTTATTTAGAGGTCAAAATATTAGAGCTAATACAGGTATTGGTGCGGCAGGAGCTGTTTCACACTAA

Protein sequence :
MLKVLALISIFAISLFAAGDATFEGKRDLNIPAIIMFFVFIAGTLGITYWAARKTKSASDFYTAGGGISGFQNGLAIAGD
YMSAAAFLGVSGLIYMSGYDGVIYAVSFLVGWPVILFFMAEKLRNLGKFTFADIAAYRLGQKEIRTLAAFGSLSVVVLYL
IAQMVGAGKLIQILFGMEYEYAVFMVGALMIIYVTFGGMLATTWVQIIKAILLLSGVSFMAVMILYHFDFSFESLAVQAV
EHHKNGEAILKPGGFLSDPISAISLGMALMLGTAGLPHVLMRFFTVGNAKEARKSVVYATGFVAYFWIIITIVGFGAIAF
LNTAEGAQYFDGAKAYLDGGKLFGGSNMASVHLSHMLGGNAFLGFISAVAFATILAVVSGLTLAGASAISHDIYANVINP
NATDEQVVKISKITVIIVGIVGVTLGIAFESQNIAYMVGLAFGIAASANFPILFLSIYWSQLTTRGAFIGGFMGLITAVV
LVILGPNVWVQILGNEKAIFPYAHPALFSVTVAFVSIWFFSKIDNSEKAIKERALFRGQNIRANTGIGAAGAVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 9e-131 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 4e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Abu_0499 YP_001489443.1 sodium:solute symporter family protein BAC0564 Protein 2e-150 65
Abu_0499 YP_001489443.1 sodium:solute symporter family protein BAC0570 Protein 1e-135 59