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Name : serS (Abu_0345) Accession : YP_001489289.1 Strain : Arcobacter butzleri RM4018 Genome accession: NC_009850 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 346070 - 347308 bp Length : 1239 bp Strand : + Note : Pfam matches to PF00587 tRNA-synt_2b, score 227.1, E-value 3.5E-065, and to PF02403 Seryl_tRNA_N, score 91, E-value 3.3E-024 DNA sequence : ATGATAGATATAAAATTACTTCAAAAAGATTTTGATTATGTAGTAAAAGCTTTACAAAAAAAAGGTGTTGATAACGCACT TTTAAATAATTTAAAAGATTTAGCTTTAAAAACAAAACAAAAAAGACAAGAAATGGAAGATGTTACAGCTGAACAAAATC TTCTATCAAAAGAGTTTGGAAGATATAAAAAAGAAAATCTTGATATAAGTGAACTTCAAGAAAAAATCAATGCTTTAAAA ACAAAAAAGCAAGAGTTAGAAGATGAAGTTAGAACTTTAGAAGATGATCTTAATTCTATTATTTTAAGTGTTCCAAATAT GCCTGATGAAAATGTTCCTTTTGGAGTTGATGAAAATGAAAATGTGATTTTGGAAGTTATTGGTGAAAAACCAACTTTTA ATTTTACACCAAAAGAGCACTGGGATTTATCTTGTGATTGGTTAGATTTTGAAAGAGGTGTAAAACTAGCAAAATCAAGA TTTACAGCAATTAAAGGTGATGGTGCTAGACTTGAGCGAGCTTTGATAAATTATATGCTTGATTTTAATAGACAAAGAGG ATTTAATGAATGGTATGTTCCATTTATGGCAAACTCAAATACTCTTCAAGGAACTGGGCAACTTCCAAAATTTGCTGATG ATTTATTTAAAATTGAAGGTGAAGATTTATATCTAATTCCAACTGCTGAAGTAAGTTTAACAAATCTTTATAATGATGAA ATCATTGATAAAAGTGAGTTACCTCTTCTTCTTACATCATATACACCTTGTTTTAGAAAAGAAGCAGGAAGTGCAGGACG AGATACAAGAGGACTTATAAGACAACACCAATTTGATAAAGTTGAGATGGTTGCTATTACTTCACAAGAACAATCAGATG AAATTTTTGAAAAAATGGTAAATTGTGCAAGTGATTTATTAAGCTCTTTAGGACTTTGTCATCAAAAAGTGCAACTTTGT AGTGGAGATTTAGGATTTAGTGCTGCTGTTACTATTGACTTAGAAGTTTGGTTACCTGGACAAAATAAATTTAGAGAAAT TTCAAGTATTTCAAATACAAGAGATTTTCAAGCTAGACGGGCGAAAATAAGATATAAAGAAGATAAAAAGAATATTTTAG CTCATACTTTAAATGGTTCAAGTTTAGCAGTTGGACGAACACTATTAGCTATTATGGAAAACTATCAACAAGCTGATGGA AGTGTAAAAATTCCAGAGGTACTTAAAAAATATTTATAA Protein sequence : MIDIKLLQKDFDYVVKALQKKGVDNALLNNLKDLALKTKQKRQEMEDVTAEQNLLSKEFGRYKKENLDISELQEKINALK TKKQELEDEVRTLEDDLNSIILSVPNMPDENVPFGVDENENVILEVIGEKPTFNFTPKEHWDLSCDWLDFERGVKLAKSR FTAIKGDGARLERALINYMLDFNRQRGFNEWYVPFMANSNTLQGTGQLPKFADDLFKIEGEDLYLIPTAEVSLTNLYNDE IIDKSELPLLLTSYTPCFRKEAGSAGRDTRGLIRQHQFDKVEMVAITSQEQSDEIFEKMVNCASDLLSSLGLCHQKVQLC SGDLGFSAAVTIDLEVWLPGQNKFREISSISNTRDFQARRAKIRYKEDKKNILAHTLNGSSLAVGRTLLAIMENYQQADG SVKIPEVLKKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-81 | 49 |
