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Name : Abu_1478 (Abu_1478) Accession : YP_001490402.1 Strain : Arcobacter butzleri RM4018 Genome accession: NC_009850 Putative virulence/resistance : Resistance Product : beta-lactamase Function : - COG functional category : V : Defense mechanisms COG ID : COG2602 EC number : 3.5.2.6 Position : 1485957 - 1486718 bp Length : 762 bp Strand : - Note : Pfam match to PF00905 Transpeptidase, score 180.5, E-value 3.8E-051 DNA sequence : ATGAATAAAAAAATAAAACTAATTTTTATTTTAATTTTTTCAATAAATTTATTCGCAAATGATGTGGAACTTGAAAATTT ATTTAAAAAATACCAAGTTGAAGGAACTTTAGTACTAGAGTCTTTAAATACAAAAAAAGTAGATATTTATAATGAAAAGC GAGCAAATACATCGTTTTCTCCTGCTTCAACATTTAAAATACCAAATACTTTGATAGCTTTAAATGAAGGTGTTGTAAAC AAAGATTCTATAATAGTTTGGGATAAAAAAGTAAGAGAGTTTGATGCTTGGAATAAAGACCAAACTTTACAATCAGCTTT TAAAAGTTCTTGTGTTTGGTGTTATAAAGAGTTCGCTTCAAAAATTGGAGTTGAAAAATATAAAAAGTATCTAAAAGAGC TTAATTATGGGAATAAAACAATAGGCAAAGATGTAACTGATTTTTGGTTGGATGAGAGTTTGAGAATTACAGCTTTTGAA GAGATAAGATTTTTAAAACAATTACAAGCAAACAATTTAGCTTTTAAAGAAGAAGATATAAATCTTCTAAAAGAGTTGAT GATTGATGAAAAAAGCGAAAATTATGTAGTTAGAGCAAAAACAGGTTGGGAAGGAAAATATGGTTGGTATGTTGGTTATG TTGAAACAAAAAATGATGTTTGGTTTTTTGCTTTAAATATCGACACAAAAACAAAAGAAGATTTAGCAAAAAGAAAAGCT TTAACTTTAGAAGCTTTAAAAACAAAAGGTATTATAGATTGA Protein sequence : MNKKIKLIFILIFSINLFANDVELENLFKKYQVEGTLVLESLNTKKVDIYNEKRANTSFSPASTFKIPNTLIALNEGVVN KDSIIVWDKKVREFDAWNKDQTLQSAFKSSCVWCYKEFASKIGVEKYKKYLKELNYGNKTIGKDVTDFWLDESLRITAFE EIRFLKQLQANNLAFKEEDINLLKELMIDEKSENYVVRAKTGWEGKYGWYVGYVETKNDVWFFALNIDTKTKEDLAKRKA LTLEALKTKGIID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ACICU_00226 | YP_001844885.1 | Beta-lactamase class D | Not tested | AbaR20 | Protein | 4e-33 | 46 |
| blaOXA-2 | YP_005176242.1 | beta-lactamase OXA-2 protein | Not tested | ICEPmu1 | Protein | 4e-32 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AF024602.1.gene3.p01 | Protein | 2e-33 | 46 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AF300985.1.gene1.p01 | Protein | 2e-31 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AF350424.1.gene1.p01 | Protein | 4e-29 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | JN205800.1.gene6.p01 | Protein | 5e-33 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | HM015773.1.gene6.p01 | Protein | 3e-33 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | HQ700343.1.gene1.p01 | Protein | 6e-35 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | M95287.gene.p01 | Protein | 2e-32 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | U63835.1.gene1.p01 | Protein | 1e-32 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | JF795487.1.gene1.p01 | Protein | 3e-31 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | EF552405.1.gene1.p01 | Protein | 2e-32 | 44 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AY500137.1.gene1.p01 | Protein | 2e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AY289608.1.gene2.p01 | Protein | 2e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AF317511.1.gene5.p01 | Protein | 3e-33 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | DQ522237.1.gene5.p01 | Protein | 3e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | L07945.1.gene1.p01 | Protein | 2e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | GQ202693.1.gene2.p01 | Protein | 2e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AF315351.1.gene2.p01 | Protein | 4e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | Y10693.2.gene1.p2 | Protein | 3e-32 | 43 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | JF800667.1.gene2.p01 | Protein | 2e-31 | 42 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AF371964.1.gene1.p1 | Protein | 9e-32 | 42 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AY139598.1.gene3.p01 | Protein | 9e-32 | 42 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | AY587956.gene.p01 | Protein | 3e-18 | 41 |
| Abu_1478 | YP_001490402.1 | beta-lactamase | JF268688.1.gene5.p01 | Protein | 2e-28 | 41 |
