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Name : clpC (BPUM_0071) Accession : YP_001485331.1 Strain : Bacillus pumilus SAFR-032 Genome accession: NC_009848 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 78323 - 80758 bp Length : 2436 bp Strand : + Note : negative regulator of genetic competence MecB DNA sequence : ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA GAACATTGGTACTGAACACATTTTACTTGGTCTAGTACGTGAGGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTCGGTCATTCCTATGTAGGGACAGA ACATATTCTCTTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCAGCCCGCGTTTTAAATAACCTCGGTGTGAGCTTAAATA AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGTAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT ACCCCAACATTAGATAGCTTAGCAAGAGATTTAACAGCGATTGCGAAAGAAGACAGCTTGGACCCTGTCATTGGACGAAG CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGCAGAAGAACAAAAAACAACCCGGTGCTGATTGGTGAGCCTGGTGTTG GTAAAACAGCCATCGCTGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTGCCTGAAATTCTACGCGATAAACGAGTG ATGACGCTTGATATGGGAACCGTTGTAGCGGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTGAAAAAAGTCATGGA CGAAATTCGCCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCTGGTGGAGCAGAGGGTG CGATTGACGCATCTAATATTCTAAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATCGGGGCGACAACATTAGATGAG TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCAGTTGATGA GAGTATTCAAATCTTAAGAGGACTTAGAGATCGTTATGAGGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT TCGAAAGTCCGCTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA AAAAGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTCTGCGTGAAAAGG TAGAGGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGACAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACCGAAACAGATAAGCTTCTAAATATGGAACAATTACT CCATTCTCGTGTAATTGGGCAGGATGAAGCAGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGACTAAAAG ATCCAAAACGTCCAATTGGCTCATTTATCTTCTTAGGCCCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCA GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCAGAATACATGGAGAAACACTCTACATCTAGACT TGTTGGGTCACCTCCTGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG TTGTGCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTTCAAGTATTAGAAGATGGTCGTCTG ACTGATTCTAAAGGGCGTACTGTTGACTTTAGAAATACGATTTTGATCATGACATCCAACGTTGGAGCTAGTGAACTGAA GCGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT TGAAACGTGCGTTCAGACCAGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCATTCACTTGAAAAGAAACATCTA AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATTGAATTGACAGAAGC AGCAAAAGCGAAGATTGCTGATGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG TGGAGGATCGACTTTCTGAGGAGCTTCTGAAGGGTAATATTGAAAAAGGTCAACAAATTGTATTAGATGTGGAAGATGGA GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA Protein sequence : MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG EIVVKTTAATN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001485331.1 | class III stress response-related ATPase | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_001485331.1 | class III stress response-related ATPase | VFG0080 | Protein | 1e-149 | 54 |
