|
Name : serS (BPUM_0509) Accession : YP_001485764.1 Strain : Bacillus pumilus SAFR-032 Genome accession: NC_009848 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 544662 - 545936 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGATATTAAACAACTGCGCACGGACTTTGATCAAATCAAAGAAAAACTAGCACACCGTGGCGAAGATTTAGCGGA TTTTGATAAGTTTGGTGAGCTGGATCAAAAAAGAAGAGAACTAATCGGAAAAACAGAAGTATTAAAGAGCCGAAGAAATG AAGTATCACAGCAAGTGGCTGTTCTAAAAAGAGAAAAGAAAGACGCCGATCACATTATTCAAGAAATGCGTGAGGTAGGA GATGAGATTAAGAAGCTGGATGATGAGCTAAGAACAGTAGAAGAAAGCTTGCAGCACATCTTATTCTCTATTCCGAATAT CCCGCATGATACGGTACCAGTTGGGGAAACAGAAGATGACAACGTGGAAGTGCGAAAATGGGGCGAACAGCCGGCATTCT CTTTTGAGCCAAAGCCACATTGGGACGTAGCGGATGAGCTAAACATTCTCGATTTTGAACGCGCAGGCAAAGTTACAGGA AGCCGTTTTGTTTTTTATAAAGGGCTTGGCGCACGCTTAGAGCGCGCACTATATAACTTTATGCTCGATTTACACGTAGA TGAGTTTGGTTTTACTGAAGTGCTCCCACCTTACATGGTCAATAGAGCAAGTATGACAGGGACTGGGCAGCTTCCAAAAT TCGAAGAGGATGCCTTTAAAATCCGTGAAGAAGATTATTTCCTCATTCCAACAGCCGAAGTACCTATTACCAACATGCAC CGTGATGAAATAATTGAAGGGGAACAACTGCCAATCAATTATGCAGCATTCAGTGCTTGCTTTAGATCAGAAGCTGGATC TGCCGGCAGAGATACACGTGGACTCATCCGTCAGCATCAATTTAATAAAGTAGAGCTTGTGAAATTTGTTAGACCTGAAG ATTCTTATGAAGAATTAGAGAAACTAACAAATCAAGCAGAAAAAGTCCTACAACTACTAAACCTACCATACCGTGTCATG AGCATGTGTACCGGAGATTTAGGTTTCACAGCTGCGAAAAAATACGACATCGAAGTATGGATTCCGAGCCAAGATACGTA TCGTGAAATTTCTTCTTGCAGTAACTTCGAAGCGTTCCAAGCAAGACGCGCAAACATTCGATTCCGTCCAGAGCCTAAAG CCAAGCCAGAGCATGTGCACACATTAAATGGATCTGGTTTAGCAGTAGGAAGAACCGTAGCGGCTATTTTAGAAAACTAT CAACAAGAGGACGGCACTGTGATCATTCCTGAAGTACTGCGTCCTTATATGGGAAATAAAGAAGTAATGAAATAA Protein sequence : MLDIKQLRTDFDQIKEKLAHRGEDLADFDKFGELDQKRRELIGKTEVLKSRRNEVSQQVAVLKREKKDADHIIQEMREVG DEIKKLDDELRTVEESLQHILFSIPNIPHDTVPVGETEDDNVEVRKWGEQPAFSFEPKPHWDVADELNILDFERAGKVTG SRFVFYKGLGARLERALYNFMLDLHVDEFGFTEVLPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITNMH RDEIIEGEQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEELEKLTNQAEKVLQLLNLPYRVM SMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRPEPKAKPEHVHTLNGSGLAVGRTVAAILENY QQEDGTVIIPEVLRPYMGNKEVMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-136 | 64 |
