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Name : ydcI (BPUM_0448) Accession : YP_001485703.1 Strain : Bacillus pumilus SAFR-032 Genome accession: NC_009848 Putative virulence/resistance : Unknown Product : RNA binding transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 487518 - 489677 bp Length : 2160 bp Strand : + Note : - DNA sequence : ATGAAGACATCTGACTTTTTATTGAAACAAATTGCAACAGAATTAAAGCTTTCAACCAAACAAATTGAAAGTGTCATCAA GCTCTTAGAGGATGGCAACACCGTCCCGTTTATTGCCCGTTACCGGAAAGAGCAGACAGGCTCGCTGGATGAGGTGCAAA TTCAAACCATTTCAGAGCGCTATACATATATCCAAAATGTCATGAACCGAAAAGAAGAAGTCATCCGGTTAATCGCAGAA CAAGACAAACTGACGGATGAATTAAAACAAAAAATTGAGCAAGCTCATAAACTGCAAGAGGTCGAAGATTTATACCGGCC ATTCAAACAAAAACGTAAAACAAAGGCAAATGTAGCCAAAGCAAAAGGGCTTGAGCCGCTGGCGGAATATATACTCACAT TGCCAAGCGATGAGATCGAGAAAAAGGCCGCTTCTTTTATCAACGAAGATAAAGAAGTAACAAGTGTAGAAGAGGCGCTT GAAGGTGCGCAGCATATCATTGCTGAACAGCTGGCAGATGATCCTGATATGCGGAAATGGATTCGTAGCGAAACGTACCA AAAGGGTAGTCTGATCACATCAGGAAAAGACATCGAAAACGATGAGAAAAATGTCTATGAAATGTATTACGATTATCAAG AGCCGATCAAAAAGATAGTGCCGCACCGTGTACTAGCGGTGAATCGCGGAGAGAAAGAAGGCATCTTAAAGGCAGCCATC GAGCCGCCTGCTGAAAATATTCGTTTCTATCTCGACAAACAAGTCATAAAAGGCAAACAGACGACGGCGAGACCGTTTAT CGAAGCGGCAATTGACGATGCATATAAACGTCTTATCCAGCCATCCATCGAACGAGAAATCCGCAAAGAGCTGACAGAAA AAGCAGAAGAACAAGCGATTCATATTTTCGCTGAAAACTTAAGAAAACTGCTGCTTCAGCCGCCGATGAAAGGGAAGCGT GTACTTGGAGTCGATCCTGCATTTCGGACAGGCTGTAAGTTAGCCGTCGTGGATGATACAGGTAAAGTCCATCATATCGG CGTCATTTACCCGCATCCGCCAGTGCAGAAAAAAGCGGAAGCGAAACAAAAAGTGAAAGAGATCATTCAATCATCAAATA TTGAAGTCATTGCAATTGGAAACGGAACAGCCTCAAGAGAGACTGAACAATTCATTGCAGACCTCATTCAAGAGCTGGAT CAGCCAGTCTCCTATTTGATTGTGAATGAAGCAGGAGCAAGTGTATACTCTGCGTCTGCACTGGCGAGAGAAGAGTTTCC AGACCTGCAAGTCGAAGAACGAAGCGCTATATCCATTGCTCGAAGATTACAAGATCCTTTAGCAGAGCTCGTGAAAATTG ATCCGAAATCTGTCGGGGTAGGCCAATACCAGCATGACGTGAGCCAAAAGCAATTAAACAGCTCGTTAACCTTCGTGGTG GAGACGGTCGTCAACCAAGTCGGTGTGAACGTCAATACGGCTTCACAGGCGCTGCTGCAATATGTGTCAGGTCTTTCAAA AGCCGTCGCAGGAAATATCATCAAACGCCGCGAAGAGATTGGAAGATTCACAAGCAGAAAAGAGCTAAAGGACATTCCGA GACTTGGGGCAAAGACTTATGAGCAGTGTATCGGTTTCCTGCGCATCGCAGATGGACAGGATCCACTCGATCGGACAGGT ATTCACCCAGAGAGCTATAAAGAAACAAAACAGTTCTTACGCATGATCAAGATGACGCCAGATGATCTTGGCACAGAGCA GTTAAAGGAGAAAATCGCAGAGGTTAAGCTGGATGAAGCAGCAGAGCAGCTTGATATTGGCATCATCACACTACAAGATA TCGTCGATCAGCTGACAAGACCTGAGCGTGATCCGCGCGATGAAGTACCAAAACCTCTTTTGAAAACAGATGTGTTGAAA TTGGAGGACTTGAAGCAAGGAATGGAGCTGCAAGGAACGGTAAGAAACGTCGTAGACTTCGGCGCATTCGTTGATATTGG CGTCAAGCAGGACGGGCTTGTCCATATTTCTAAGCTCAGCAACCGTTTTGTAAAGCACCCGCTTGACGTTGTATCAGTTG GTGACATTGTGACTGTATGGGTGGACTCCGTTGACCAGGCAAAAGGCCGCGTTGCCCTCTCCATGCTGAAACCAGAATAA Protein sequence : MKTSDFLLKQIATELKLSTKQIESVIKLLEDGNTVPFIARYRKEQTGSLDEVQIQTISERYTYIQNVMNRKEEVIRLIAE QDKLTDELKQKIEQAHKLQEVEDLYRPFKQKRKTKANVAKAKGLEPLAEYILTLPSDEIEKKAASFINEDKEVTSVEEAL EGAQHIIAEQLADDPDMRKWIRSETYQKGSLITSGKDIENDEKNVYEMYYDYQEPIKKIVPHRVLAVNRGEKEGILKAAI EPPAENIRFYLDKQVIKGKQTTARPFIEAAIDDAYKRLIQPSIEREIRKELTEKAEEQAIHIFAENLRKLLLQPPMKGKR VLGVDPAFRTGCKLAVVDDTGKVHHIGVIYPHPPVQKKAEAKQKVKEIIQSSNIEVIAIGNGTASRETEQFIADLIQELD QPVSYLIVNEAGASVYSASALAREEFPDLQVEERSAISIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKQLNSSLTFVV ETVVNQVGVNVNTASQALLQYVSGLSKAVAGNIIKRREEIGRFTSRKELKDIPRLGAKTYEQCIGFLRIADGQDPLDRTG IHPESYKETKQFLRMIKMTPDDLGTEQLKEKIAEVKLDEAAEQLDIGIITLQDIVDQLTRPERDPRDEVPKPLLKTDVLK LEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNRFVKHPLDVVSVGDIVTVWVDSVDQAKGRVALSMLKPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 5e-127 | 43 |
