Gene Information

Name : BPUM_0353 (BPUM_0353)
Accession : YP_001485608.1
Strain : Bacillus pumilus SAFR-032
Genome accession: NC_009848
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 394722 - 395405 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATATTAATGATTGAAGACAATCAGAGTGTGTGTACAATGACCGAAATGTTTTTTCAAAGAGAAGGGTTTCAGGC
GGAATTCGTTCATGATGGTCAAGACGGCTTAAATCGGTTTAAGCAAGAAGATGATTGGGATCTGCTGATATTAGATATCA
TGCTTCCTTCAATGGATGGTCTAACCATCTGTCAAAAGGTGCGTCAGATCAGTGATGTTCCGATCATTATGCTGACAGCA
AAAGAGACGGAGTCTGATCAGGTGCTTGGTTTTGATCTAGGGGCAGATGATTATGTGACCAAGCCTTTTAGCCCCCTGAC
CTTAATGGCAAGAATCAAAGCGGTGAAACGCCGATTCACGCAAACAACGATTCAAAAAGAAGACGAACGTCTGGCAACAG
CACATTTCCTGTTAGATAAAAAAACAAGAGAGGTTTTTCTAGATGGTGAGCCAATTGAGAATCTGACGCCGAAGGAATAT
GATTTGCTGTGCTTTTTTATTCAGCACCCTCGACAAGTATTTTCGCGCGAGCAATTGCTGGAGCAAATTTGGGGATATCA
ATTTTATGGAGATGAACGAACGGTCGATGTTCATATTAAACGGCTGCGCCAAAAAATCGGAGACGGACCTAAGCCCTTTC
TGTATACGGTATGGGGCGTAGGGTATAAGTTCGATGAAGATTAA

Protein sequence : 
MKILMIEDNQSVCTMTEMFFQREGFQAEFVHDGQDGLNRFKQEDDWDLLILDIMLPSMDGLTICQKVRQISDVPIIMLTA
KETESDQVLGFDLGADDYVTKPFSPLTLMARIKAVKRRFTQTTIQKEDERLATAHFLLDKKTREVFLDGEPIENLTPKEY
DLLCFFIQHPRQVFSREQLLEQIWGYQFYGDERTVDVHIKRLRQKIGDGPKPFLYTVWGVGYKFDED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-31 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPUM_0353 YP_001485608.1 response regulator AE016830.1.gene1681. Protein 1e-37 43
BPUM_0353 YP_001485608.1 response regulator NC_010400.5986590.p0 Protein 2e-33 42
BPUM_0353 YP_001485608.1 response regulator NC_011595.7057856.p0 Protein 4e-34 42
BPUM_0353 YP_001485608.1 response regulator NC_010410.6002989.p0 Protein 4e-34 42
BPUM_0353 YP_001485608.1 response regulator NC_002758.1121390.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_010079.5776364.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_002952.2859858.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_007622.3794948.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_003923.1003417.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_013450.8614146.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_002951.3238224.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator NC_007793.3914065.p0 Protein 9e-28 41
BPUM_0353 YP_001485608.1 response regulator AE000516.2.gene3505. Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPUM_0353 YP_001485608.1 response regulator VFG1563 Protein 7e-32 42
BPUM_0353 YP_001485608.1 response regulator VFG1702 Protein 2e-31 42