Gene Information

Name : ytrE (BPUM_2674)
Accession : YP_001487892.1
Strain : Bacillus pumilus SAFR-032
Genome accession: NC_009848
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2688726 - 2689424 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGATTCAGATTCAAGCGTTAGATCATGTGTTTAAAATTGGTAAAAAGGGCAGAGAGAATGAGATTCCTGTGTTAAAAGG
GATTGACTTATCTATTAAAAGAGGCGACATTGCTTGTATAGTGGGGCGAAGTGGCTCGGGGAAATCTACCCTATTGAACT
TAATTTCAGGATATATTACGCCGACGGGCGGACAAATTGTCATTGATGGTACCGATGTGACAGGATTTAATGAAAAAGAA
TGGGCGGACTTCCGCTTAGATCACTTTGGTTTTATCTTTCAAAGCTTTCAATTGATCGGGAGCTTAACAACGTATGAAAA
TGTTGAACTTCCGCTCACTTTAAAAGGTGTGAAGCCGTCTGAACGAAAGGCGAAAGTAAATGAAATGCTGAAACGAGTAG
GTCTAGAACATCATGCAGGGCATTACCCGAATGAGTTGTCAGGCGGGCAGCAGCAGCGTGTGAGTATTGCAAGAGCCTTG
ATTTTAAATCCATCTATTATTTTAGCGGATGAACCAACAGGCAGTCTAGATTCAGAAACCGAAGGGGAAATTTTAGCTTT
TATCCAGCAGCTCAATCGTGAAAAAGGAATCACATTTGTCATCATTACACATGACGATGAAGTTGCTTCAATCGCAGATA
CCACGTTTCAGCTCCATGATGGTGTATTAAAGAAAGGGGAACAATCCATTGAAATTTAG

Protein sequence : 
MIQIQALDHVFKIGKKGRENEIPVLKGIDLSIKRGDIACIVGRSGSGKSTLLNLISGYITPTGGQIVIDGTDVTGFNEKE
WADFRLDHFGFIFQSFQLIGSLTTYENVELPLTLKGVKPSERKAKVNEMLKRVGLEHHAGHYPNELSGGQQQRVSIARAL
ILNPSIILADEPTGSLDSETEGEILAFIQQLNREKGITFVIITHDDEVASIADTTFQLHDGVLKKGEQSIEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_001487892.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-43 46
ytrE YP_001487892.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-40 43
ytrE YP_001487892.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-37 43