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Name : pdhD (BPUM_1358) Accession : YP_001486601.1 Strain : Bacillus pumilus SAFR-032 Genome accession: NC_009848 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1413220 - 1414632 bp Length : 1413 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTAGGAGATTTCCCAATCGAAACAGATACTCTTGTCATCGGTGCAGGTCCTGGTGGATATGTAGCTGCTATTCG TGCTGCACAGCTTGGACAAAAAGTAACAATCGTTGAAAAAGGAACACTTGGCGGTGTATGTCTAAACGTTGGTTGTATTC CTTCAAAAGCATTAATCAATGCTGGCCATCGTTTCGAAAATGCTAAGCATTCTGAAGACATGGGTATCAAAGCTGAAAAC GTAACAGTTGATTTCACAAAAGTTCAAGAGTGGAAAGCTTCTGTTGTAAACAAATTAACAGGTGGAGTTCAAGGTCTTCT TAAAGGAAATAAAGTAGACATCGTTAAAGGTGAAGCTTATTTCGTAGACAGCAACTCTGTACGTGTAATGGATGAAAATT CAGCACAGACGTACACTTTCAAAAATGCAATTCTTGCAACTGGATCTCGGCCAATTGAATTGCCTACTTTTAAATACACA GACCGCGTGATCAACTCAACTGGTGCTTTGGCGCTTAAAGAAGTACCTAAGAAGTTAGTTGTAATCGGTGGTGGATATAT CGGTACTGAGCTTGGTACTGCTTATGCAAACTTTGGAACAGAAGTTGTCATTCTTGAAGGTGGAGACGAAATCCTTCCAG GTTTCGAAAAGCAAATGAGCTCATTGGTTAAACGTAACCTGAAGAAAAAAGGAAACGTTGAAATCCATACAAACGCTCTT GCAAAAGGCGTTGAAGAAAAATCTGATGGTGTCACTGTTACTTTCGAAGTAAAAGGTGAAGAAAAAACAGTTGATGCTGA TTACGTACTTGTGACTGTTGGTCGTCGTCCAAACACAGATGAGCTTGGTCTTGAGCAAGTTGGTGTTGAATTAACTGACC GCGGAGTTGTCAAAACAGACAAACAATGCCGTACAAGCGTATCTAACATCTATGCAATTGGTGACATCGTTGATGGACCA CCACTTGCACACAAAGCTTCTTACGAAGGTAAAATTGCAGCTGAAGCAATCGCTGGAGAGCCAGCTGAAATTGATTACCT TGGTATTCCTGCTGTTGTATTCTCTGAGCCAGAACTTGCAACTGTTGGATACACTGAAGCAGAAGCAAAAGAAGAAGGAA TCGACATCGTTGCAGCGAAATTCCCATTCGCAGCAAACGGACGTGCACTTTCTCTTGATGCAACTGATGGCTTCATGAAG ATGATCACTCGTAAAGAGGATGGTCTTGTGATCGGTGCACAAATCGCAGGTGTTGGCGCTTCTGATATGATTTCAGAGCT TAGCCTTGCAATCGAAGCTGGAGTGACTGCTGAAGATATCGCAATGACAATTCACGCACACCCAACTTTAGGTGAAATTA CAATGGAAACGGCTGAAGTAGCAATCGGAAGCCCAATCCATATCGTAAAATAA Protein sequence : MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGTLGGVCLNVGCIPSKALINAGHRFENAKHSEDMGIKAEN VTVDFTKVQEWKASVVNKLTGGVQGLLKGNKVDIVKGEAYFVDSNSVRVMDENSAQTYTFKNAILATGSRPIELPTFKYT DRVINSTGALALKEVPKKLVVIGGGYIGTELGTAYANFGTEVVILEGGDEILPGFEKQMSSLVKRNLKKKGNVEIHTNAL AKGVEEKSDGVTVTFEVKGEEKTVDADYVLVTVGRRPNTDELGLEQVGVELTDRGVVKTDKQCRTSVSNIYAIGDIVDGP PLAHKASYEGKIAAEAIAGEPAEIDYLGIPAVVFSEPELATVGYTEAEAKEEGIDIVAAKFPFAANGRALSLDATDGFMK MITRKEDGLVIGAQIAGVGASDMISELSLAIEAGVTAEDIAMTIHAHPTLGEITMETAEVAIGSPIHIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-112 | 52 |
