Gene Information

Name : appC (BPUM_1064)
Accession : YP_001486308.1
Strain : Bacillus pumilus SAFR-032
Genome accession: NC_009848
Putative virulence/resistance : Resistance
Product : oligopeptide ABC transporter membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1151474 - 1152373 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence : 
ATGGGAACGCCTCCTGTTGATCTCAAATTAAAAGAGGGACTTCCGCCAAAGCCAGAGACGATGCTGCGTTTATTTTGTGA
GAAATTTTTCAAAAATAAATTGGCGGTTGCCGGCTCCGTGATCTTATTGATCATTATCTTTTCAGCCATTTTTGCTCCTG
TGATTGCCCCTTACGCACCAGAGCAGCAAGATTTATTAAAACGGCTCCAGCCGCCAAGTGCAGAGCATTTGATGGGAACT
GACAAGTTTGGCCGAGATATTTTCTCAAGGGTGCTTTATGGAGCGAGAGTCTCTTTATTAGTCGGTTTTGTCTCAGTGGT
CGGTGCGATTACCATTGGCACTGTGGTCGGAGCGGTAGCGGGGTATTTCAAAGGATTTGTTGATTCCTTGTTAATGAGAT
TTGTGGATGTTGTGTTGTCGATCCCTGACATTTTTCTCTTAATCACGCTCGTCACCATTTTCAAGCCGGGCATTGATAAA
TTGATTTTAATCTTTGCTTTGACCGGCTGGACCACAACCGCGAGACTGATCCGCAGTGAATTTTTATCATTGCGAACAAG
AGAATTCGTACTCGCAGCAAGAACCATTGGAACGAAAAATCATGTCATCATCTTTTCACATATTTTACCGAACTGTATCG
GTCCTATTATTGTGTCAGCTACCCTTAAAGTAGGTTCCGTCATTTTAGCTGAATCAACGCTGAGCTATCTAGGATTTGGC
ATACAGCCGCCAACCGCGAGCTGGGGCAACATGCTACAAGATGCACAAAATTTCTCGATTATGGTGCAAGCGTGGTGGTA
TCCGCTCTTCCCAGGTTTACTCATATTGCTGACCGTTTTATGCTTTAACTTCTTAGGTGATGGACTAAGAGATGCCCTTG
ATCCTAAAAAATTAAAGTAA

Protein sequence : 
MGTPPVDLKLKEGLPPKPETMLRLFCEKFFKNKLAVAGSVILLIIIFSAIFAPVIAPYAPEQQDLLKRLQPPSAEHLMGT
DKFGRDIFSRVLYGARVSLLVGFVSVVGAITIGTVVGAVAGYFKGFVDSLLMRFVDVVLSIPDIFLLITLVTIFKPGIDK
LILIFALTGWTTTARLIRSEFLSLRTREFVLAARTIGTKNHVIIFSHILPNCIGPIIVSATLKVGSVILAESTLSYLGFG
IQPPTASWGNMLQDAQNFSIMVQAWWYPLFPGLLILLTVLCFNFLGDGLRDALDPKKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
appC YP_001486308.1 oligopeptide ABC transporter membrane protein BAC0272 Protein 2e-30 41