Gene Information

Name : glnA (P9215_09701)
Accession : YP_001484171.1
Strain : Prochlorococcus marinus MIT 9215
Genome accession: NC_009840
Putative virulence/resistance : Virulence
Product : glutamine synthetase, glutamate--ammonia ligase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 840097 - 841518 bp
Length : 1422 bp
Strand : -
Note : COG174 Glutamine synthetase [Amino acid transport and metabolism]

DNA sequence :
ATGTCTAAATCTCCACAAGATGTTTTAAGTCAAATTAAAGATGAAGGAATTGAACTTATCGATTTAAAATTCGCAGACAT
CCATGGTAAATGGCAACACTTAACTCTTACATCAGACATGATAGAAGAGGATTCATTTACAGAAGGTCTAGCATTTGATG
GCTCATCAATAAGAGGTTGGAAAGCAATTAATGCCTCCGATATGTCAATGGTCCCTGATGCAAGTACAGCATGGATAGAT
CCTTTTTATAAACATAAAACTCTAAGTATGATTTGCTCTATCCAAGAGCCTAGAAGCGGTGAACCTTATGATAGATGCCC
AAGATATTTAGCTCAAAAGGCTATTAAATACCTAGAATCAACTGGGATAGCCGATACAGCATTTTTTGGACCGGAACCAG
AATTCTTCTTATTTGATGATGTTAGATACGACTCAAAAGAAGGTTCGTGCTTTTACAGTGTAGATACAATTGAAGCTCCT
TGGAACACAGGAAGAATTGAAGAAGGTGGAAATTTAGGATACAAGATCCAATACAAAGAAGGTTATTTCCCAGTTTCTCC
GAATGATACTGCGCAAGACATCAGATCTGAAATGCTACTTTTAATGGGTGAATTAGGTATTCCCACAGAAAAGCATCACC
ATGAAGTTGCTGGCGCCGGCCAACACGAACTTGGAATGAAATTCGATTCGTTAATAAATTCTGCAGATAACGTAATGACT
TATAAATACGTTGTCAGGAATGTTGCTAAAAAATACGGGAAAACTGCAACATTTATGCCCAAGCCTGTATTTAACGATAA
TGGAACTGGAATGCATGTTCACCAAAGTTTATGGAAGAGTGGTCAGCCATTATTTTTTGGTGAAGGAGCATATGCAAATT
TATCTCAAACAGCAAGATGGTACATCGGAGGCATACTTAAACATGCTCCATCCTTCTTAGCATTTACCAACCCAACTACA
AATAGTTACAAACGATTGGTTCCAGGATTCGAAGCGCCTGTAAATCTAGTTTATTCTGAGGGTAATAGATCAGCTGCAGT
AAGAATTCCTTTAACAGGTCCAAGCCCTAAAGCTAAAAGATTAGAATTCCGATCAGGTGACGCACTTGCAAATCCTTACT
TAGCATTTTCTGTAATGATGCTTGCTGGTATTGATGGCATTAAAAATCAAATTGATCCTGGTGATGGAGTGGATGTAGAT
TTATTTGAACTTCCAGCTGATGAACTTGCCAAAATTGATACAGTACCTTCATCATTAAATGACTCACTTAATGCGCTAAA
AGCAGATAATGAATATCTATTAGCTGGTGGTGTATTTACTGAAGATTTTATTGATAACTTTATTGATATAAAATACGAAG
AGGTACAACAATTAAGACAAAGACCTCATCCACATGAATTCTTCATGTATTACGATGCATAA

Protein sequence :
MSKSPQDVLSQIKDEGIELIDLKFADIHGKWQHLTLTSDMIEEDSFTEGLAFDGSSIRGWKAINASDMSMVPDASTAWID
PFYKHKTLSMICSIQEPRSGEPYDRCPRYLAQKAIKYLESTGIADTAFFGPEPEFFLFDDVRYDSKEGSCFYSVDTIEAP
WNTGRIEEGGNLGYKIQYKEGYFPVSPNDTAQDIRSEMLLLMGELGIPTEKHHHEVAGAGQHELGMKFDSLINSADNVMT
YKYVVRNVAKKYGKTATFMPKPVFNDNGTGMHVHQSLWKSGQPLFFGEGAYANLSQTARWYIGGILKHAPSFLAFTNPTT
NSYKRLVPGFEAPVNLVYSEGNRSAAVRIPLTGPSPKAKRLEFRSGDALANPYLAFSVMMLAGIDGIKNQIDPGDGVDVD
LFELPADELAKIDTVPSSLNDSLNALKADNEYLLAGGVFTEDFIDNFIDIKYEEVQQLRQRPHPHEFFMYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-97 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001484171.1 glutamine synthetase, glutamate--ammonia ligase VFG1399 Protein 1e-122 56