Gene Information

Name : thiC (P9215_18851)
Accession : YP_001485084.1
Strain : Prochlorococcus marinus MIT 9215
Genome accession: NC_009840
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1623173 - 1624543 bp
Length : 1371 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAGAAGTTCTTGGATTAAGCCTCGTCTTGGGAAAAACAATGTAACTCAGATGAACTTTGCGAGAAATGGATATCTAAC
TGAAGAAATGGATTTTGTTGCTAAAAAAGAGAATCTACCTTCTTCTTTAATAATGGAGGAAGTGGCAAGAGGAAGATTAA
TTATTCCAGCAAATATTAATCATTTGAATCTTGAGCCAATGTCTATAGGTATTGCCTCTAGATGCAAAGTTAATGCCAAT
ATTGGTGCTTCTCCTAATGCAAGTGATATTAATGAAGAGGTAGAAAAACTCAAACTAGCAGTTAAATATGGTGCTGATAC
AGTTATGGATCTTTCTACGGGGGGAGTAAATTTAGATGAAGTCCGTCAAGCAATTATTCAAGAATCTCCTGTTCCCATAG
GAACTGTTCCTGTTTATCAAGCTTTAGAAAGTGTGCATGGTTCAATAGATAGACTTACAGAGGACGATTTTCTACATATT
ATTGAAAAACATTGTCAGCAGGGCGTAGATTATCAAACTATTCATGCGGGTTTATTAATAGAGCATTTGCCAAAAGTTAA
AGGAAGAATTACTGGAATTGTAAGTAGAGGGGGAGGCATTTTAGCCCAATGGATGTTACATCATTTTAAGCAAAATCCGC
TCTATACAAGGTTTGATGATATTTGTGAAATTTTTAAGAAATATGATTGTACTTTTTCTCTAGGAGATTCACTAAGACCT
GGATGTTTACATGATGCTTCTGATGATGCCCAGTTAGCTGAATTGAAGACCTTAGGTGAGCTTACTCGAAGAGCATGGGA
ACATAATGTTCAAGTAATGGTTGAGGGTCCTGGTCATGTACCTATGGATCAAATTGAGTTTAATGTGAGAAAACAAATGG
AAGAATGTTCAGAAGCTCCTTTCTATGTACTTGGTCCATTAGTAACAGATATTTCTCCTGGTTATGACCATATATCAAGT
GCTATTGGGGCAGCGATGGCAGGGTGGTATGGAACTTCTATGTTATGTTATGTAACCCCAAAAGAACATCTAGGTCTCCC
AAATGCAGAAGATGTAAGAGAAGGATTAATCGCTTATAAAATAGCCGCTCATGCTGCTGATATAGCAAGGCACAGAGCTG
GCGCTCGTGATCGAGATGATGAACTTAGTTATGCAAGGTATAACTTTGATTGGAATAAACAATTTGAACTTTCATTAGAT
CCAGAAAGGGCAAAGCAGTATCATGATGAGACACTACCTGAAGAAATTTTTAAAAAGGCCGAGTTTTGTTCAATGTGTGG
TCCAAAACATTGTCCAATGAATTCAAAGATTTCAGATGAATCTCTTGATCAGTTAAAAGATAAACTTGAAGAATGTAATA
CTTCAGCGTAG

Protein sequence :
MRSSWIKPRLGKNNVTQMNFARNGYLTEEMDFVAKKENLPSSLIMEEVARGRLIIPANINHLNLEPMSIGIASRCKVNAN
IGASPNASDINEEVEKLKLAVKYGADTVMDLSTGGVNLDEVRQAIIQESPVPIGTVPVYQALESVHGSIDRLTEDDFLHI
IEKHCQQGVDYQTIHAGLLIEHLPKVKGRITGIVSRGGGILAQWMLHHFKQNPLYTRFDDICEIFKKYDCTFSLGDSLRP
GCLHDASDDAQLAELKTLGELTRRAWEHNVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDISPGYDHISS
AIGAAMAGWYGTSMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADIARHRAGARDRDDELSYARYNFDWNKQFELSLD
PERAKQYHDETLPEEIFKKAEFCSMCGPKHCPMNSKISDESLDQLKDKLEECNTSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 6e-117 59
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 6e-117 59
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-112 55