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Name : clpC (P9215_12241) Accession : YP_001484425.1 Strain : Prochlorococcus marinus MIT 9215 Genome accession: NC_009840 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1041409 - 1043937 bp Length : 2529 bp Strand : - Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTCGAAAGATTTACAGAAAAGGCAATAAAAGTCATTATGCTTGCTCAAGAAGAAGCAAGAAGACTTGGTCATAATTT TGTTGGAACTGAACAAATACTTTTAGGGTTAATTGGAGAAGGAACTGGGGTTGCAGCGAAAGTACTTAAATCTCTTGGAG TGAATTTAAAAGATTCAAGGATAGAGGTAGAAAAGATAATAGGAAGAGGCTCAGGGTTTGTTGCTGTGGAAATACCTTTT ACTCCTAGGGCTAAAAGAGTTTTAGAATTATCCCTTGAAGAAGCTCGTCAACTTGGTCACAATTACATAGGTACAGAACA TTTATTATTAGGTTTAATAAGAGAAGGAGAGGGAGTTGCTGCAAGAGTTCTTGAAAATCTTAATATTGACCTTACCAAAG TAAGAACTCAAGTTATAAGGATGCTTGGTGAAACAGCTGAAGTTGGTACAGGGGGAAGTACAGCTAAGAGCAACTTAAAA ACTGCTACTCTTGACGAATTTGGCACAAATTTAACAAAATTAGCTAGTGAATCAAAATTAGATCCAGTCGTTGGCCGCCA CTCAGAAATTGATCGTGTAGTTCAAATATTAGGTAGGAGGACAAAAAATAATCCTGTTCTCATTGGTGAGCCAGGTGTAG GTAAAACAGCTATAGCAGAAGGTTTAGCTCAAAGAATACAAACTGGAGATATTCCAGACATACTTGAAGATAAAAGAGTT TTAACACTTGATATAGGACTTTTGGTTGCCGGAACAAAGTATAGAGGTGAATTTGAAGAAAGGTTAAAAAAAATAATGGA AGAAATTAAATCAGCAGGAAACGTTATACTCGTTATAGATGAAGTTCATACTCTAATTGGTGCTGGAGCTGCTGAAGGGG CTATAGACGCAGCAAATATTCTGAAGCCAGCATTAGCGAGGGGAGAACTTCAATGCATTGGAGCTACAACTCTAGATGAA TACAGAAAACATATTGAGAGAGATGCTGCTCTGGAAAGAAGATTCCAGCCTGTAATGGTTGGGGAGCCCTCTATTGAGGA TACAATCGAAATTTTAAAAGGTCTTAGAGAGCGTTACGAGCAACATCATCGTCTAAAAATTACTGATGATGCGCTAGAGG CAGCAGCTCATTTAGGTGATCGTTATATATCTGATAGATTTTTACCTGATAAGGCTATAGACCTCATAGACGAGGCTGGA AGTAGAGTCCGTTTAATAAACTCTAAACTTCCGCCCGAAGCAAAAGAAATAGATAGAGAACTAAGACAAGTTCAAAAACA AAAAGAAGAATCTGTAAGAGACCAAAATTTTGATCAAGCAGGCCAATTGCGTGAAAAAGAGATGGAATTGTCAGCAAAAA TCAAAGAGGTATTGGAAAATAAAAAAGAATCTACAGTTGGAGATAAATCTAATGCAGATAATGAATCTGTAAAAGGCGAT TCAACACTCTTACAAAGCCCCCTTGTTAGTGAAGAGGATGTAGCACATATTGTGGCTTCATGGACAGGAGTTCCTGTTCA AAAATTAACAGAAACTGAATCAGTCAAACTTCTTAATATGGAGGAGACACTTCACCAAAGGTTAATTGGACAAGATGAAG CTGTAAAAGCTGTCTCTAGAGCTATAAGAAGAGCAAGAGTTGGATTGAAAAATCCTAATAGACCCATTGCAAGTTTCATC TTTTCTGGTCCTACCGGTGTAGGTAAAACTGAATTAACTAAATCTTTAGCTTCATATTTCTTCGGTAGTGAAGAAGCAAT GATTAGATTAGATATGTCAGAATTTATGGAAAGACATACAGTTAGTAAACTTATAGGTTCGCCTCCTGGGTATGTTGGTT TTAATGAAGGTGGTCAGCTTACTGAGGCTGTCAGAAGACGTCCCTATACTGTTGTTTTATTTGATGAAGTTGAAAAGGCT CATCCAGATGTATTCAATTTATTGTTGCAACTATTGGAAGACGGAAGATTAACTGACTCCAAGGGGAGAACTGTTGATTT TAAAAATACATTGTTAATTATGACTTCTAATATCGGTTCTAAAGTAATCGAAAAAGGTGGAGGCGGTCTTGGATTTGAAT TCTCAGGTGATTCAGTTGAAGATAGCCAATATAACAGAATAAAATCTTTAGTTAATGAAGAACTTAAGCAATATTTTAGG CCTGAATTTTTAAATAGACTTGATGAAATAATTGTATTCAGGCAACTAACTAAGAATGAAGTTAAAGAAATTGCTGAAAT AATGTTGCAAGAAGTTTTTGCAAGACTACAAGATAAAGGCATTAAATTAAATGTAACTGATGCTTTCAAAGAAAGACTTG TAGAAGAAGGTTATAATCCTTCTTACGGAGCAAGACCATTGAGAAGGGCAGTTATGCGTTTACTAGAAGATAGTTTGGCT GAAGAAGTTCTTTCCGGGAGAATTAAAGATGGAGATAATGCTTTAGTTGATATAGATGATAATAAAAAAGTTACAATAAA TATTTCTTCTGAAGAATCTTCTCAAGAGTTAGCAAGTGCTAACTTCTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGETAEVGTGGSTAKSNLK TATLDEFGTNLTKLASESKLDPVVGRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAG SRVRLINSKLPPEAKEIDRELRQVQKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLENKKESTVGDKSNADNESVKGD STLLQSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFI FSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKA HPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR PEFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSLA EEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELASANF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001484425.1 | ClpC | VFG0079 | Protein | 0.0 | 59 |
| clpC | YP_001484425.1 | ClpC | VFG0080 | Protein | 1e-150 | 49 |
