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Name : clpB (C8J_0473) Accession : YP_001482049.1 Strain : Campylobacter jejuni 81116 Genome accession: NC_009839 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 479864 - 482437 bp Length : 2574 bp Strand : - Note : - DNA sequence : ATGGCAAATATACAAAATTTTCTAACTGATAATATGCTTTCAAACCTTGAAAGCGCAGCATCTTTAGCTATACATTCTAA AAATAATGAAGTTGCACCTTTACATCTTTTATGGGCTTTAAGCGTAGATAGTACAAGTATTTTAAATCAAATTTTAAATA AATTAAATATTTCCAAAGAAGCCTTAGAACTTGAAATTAAAAGCAGAATTTCAAAACTTGCAACGAGTTCAAATGTAAAC CGTGAAAATATACGCTTTTCCAATGAACTTATAAATTCATTAGAAAATGCTAAAGGATTAATGAGTGCTAATGGAGATAG TTATTTAAGTGTGGATACTTGGCTTATAAGTGAAAGTCAAAAAAGTCCTACTAAAGAAATTTTGGCGCAATTTTTAGATT TAAGAGAATTTCAAAAAGAGCTTGAAAGTCTAAGAGCGGGACGCAAAATCGATAGCAAAACAAGCGATGAAACCTTAGAC AGCTTAAATAAATTTGGTATAGATTTAACCTTAAAAGCAAGCGAAGGTAAACTTGATCCTGTTATAGGCAGAGAAGAAGA AATCGAACGTTTAATGCAAATTTTAATACGCAAAACCAAAAATAACCCTATACTTTTAGGTGAACCAGGCGTAGGAAAAA CAGCTATAGTGGAAGCTTTAGCACAAAGAATTATTAAAAAAGATGTTCCAAAATCTTTGCAAAATAAAAAAGTTATCGCT CTTGACATGAGTGCTTTAATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGACAGATTAAAAGCTGTCGTTAATGAAGT GATAAAAAGTGAAAATATCATTCTTTTTATCGATGAAATTCACACTATAGTAGGAGCTGGAGCGAGTGAAGGCAGTATGG ATGCGGCAAATATTTTAAAACCTGCTCTTGCAAGAGGTGAACTCCATACTATAGGCGCAACTACTTTAAAAGAATATCGT AAATATTTTGAAAAAGATGCAGCCTTGCAACGCCGTTTTCAACCTGTAAATGTAGGTGAGCCAAGCGTTAATGAGGCTTT GGCTATGTTAAGGGGTATAAAAGAAAAGCTTGAAATTCATCATAATGTAACTATAAATGATAGCGCTTTAGTAGCTGCAG CTAAACTTTCAAAGCGTTATATAGCGGATCGTTTTTTACCTGATAAGGCCATTGATTTAATCGATGAAGCTGCAGCTGAA CTGAAAATGCAAATTGAAAGCGAACCAAGTTCTTTAAGAAAAGTACGCAAAGATATAGAAACTTTAGAAGTTGAAAATGA AGCTTTAAAAATGGAAAATGACGAGAAAAATCAAAAAAGACTTGATGAAATCGCAAAAGAACTAGCCAATTTAAAAGAAA AACAAAATGCCTTAAATTCACAGTTTGAAAATGAAAAAAGTGTTTTTGATGGCATAAGTGCTAAGAAAAAAGAAATTGAT CTGCTTAAAAATGAAGCTTCTTTGGCTAAAGCTAGAGGTGAATTTCAAAAAGCAGCCGAGCTAGAGTATGGAAAAATTCC AAGTCTTGAAAAAGAAGTAGAAATTTTAGAAGATAAATGGAAAAAAATGAGTGAAAATGGAGTTTTACTTAAAAATCAAG TGGATGAGGATTTGGTTGCTGGAATTTTAAGCAAATGGACGGGTATTAGCGTGCAAAAAATGTTAACTTCTGAAAAACAA AAATTCTTAGAAGTGGAAAAACATTTAAAAGAAAGTGTCATAGGACAAGATAAGGCCTTAAGTGCTTTAGCTAGAGCCAT TAAACGCAACAAAGCAGGACTTAATGCGGACAATAAACCTATAGGAAGCTTTTTATTTTTAGGGCCAACAGGGGTAGGAA AAACACAATCAGCTAAAGCTTTGGCAAAATTTTTATTTGACGATGAAAAAGCAATGATTCGCTTTGATATGAGTGAATTT ATGGAAAAACATAGTGTTTCAAGACTCTTAGGCGCACCTCCAGGGTACATAGGACATGAAGAAGGTGGAGAGCTTACTGA AGCTGTGCGAAGAAAACCTTATAGCGTGCTTTTGTTTGATGAAGTTGAAAAAGCACATAAAGATGTATTTAATGTGCTTT TAGGGATTTTAGATGATGGTAGAGCAACCGATAGCAAAGGTGTAACAGTGGATTTTAAAAATACCATTATCATTTTAACT TCTAATATTGCCTCAAGCGCTATTATGAATTTAAGCGGAAAAGAACAAGAAGATGTGGTAAAAAATGAGTTAAAAAATTT CTTTAAACCTGAGTTTTTAAACCGCTTAGATGATATTATCACCTTTAATCCACTTGGAAAAGATGAAGCTTATGAAATAG TTAAGCTTTTATTTAAAGATTTACAAATGAGCTTAGAAAACAAGGGGATAAAAGCGAGTTTAAGCGAAAATGCAGCCCTT TTAATCGCTAAAGATGGTTTTGATCCTGATTTTGGTGCTAGACCTTTAAGAAGAGCTATTTATGATCTTATAGAAGATAA ATTAAGCGATATGATACTTGCTGATGAACTTCATGAAAATGATAGCATTATCATTGATGCAAAAGATGATGAAATAATCA TCAAAAAAGCTTAA Protein sequence : MANIQNFLTDNMLSNLESAASLAIHSKNNEVAPLHLLWALSVDSTSILNQILNKLNISKEALELEIKSRISKLATSSNVN RENIRFSNELINSLENAKGLMSANGDSYLSVDTWLISESQKSPTKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLD SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIA LDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR KYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAIDLIDEAAAE LKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEID LLKNEASLAKARGEFQKAAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQ KFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEF MEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILT SNIASSAIMNLSGKEQEDVVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAAL LIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-144 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001482049.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 4e-104 | 42 |
