Gene Information

Name : C8J_1565 (C8J_1565)
Accession : YP_001483139.1
Strain : Campylobacter jejuni 81116
Genome accession: NC_009839
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1575423 - 1576073 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAGAACTTATTAAAATAAACAACTTAAATAAAGAATTTGGCAAAGTTAAAGCCTTAAACAATATCAACTTAAG
CGTCTATGAAGGAGAATGGCTTGCCATCATGGGTCCATCAGGAAGTGGAAAATCAACGCTTTTAAACATACTATCACTCA
TGGACACTCCAAGCTCTGGGGAGTATATCTTAGACAATGAAAACCTAGAGCAAATGGATGAGGAGCAAAAAATCACCTTA
CGTCGTGAAAAAATAGGGCTTGTCTTTCAACAATTTCATCTTATCCCCTATCTTAACGCCTTAGAAAATGTTATGCTCTC
TCAGTATTATCACTCAAGCGTAGATGAAGAAGATACTAAAATGGTTCTTGAAAAAGTAGGACTTTCGCACAGACTCACTC
ATTTACCTAGCCAATTAAGTGGTGGAGAACAACAAAGAGTTTGCATAGCAAGAGCTTTGATCAACAACCCAGAGCTTTTA
CTCGCAGATGAACCCACAGGGAATTTAGATGAAGCCAATGAACAAATCGTTCTTCAAACCTTGCAAAAATTAAAAAATGA
AGGCAAAACCATAGTTTTAATCACACACAATCCTGATTTAGCCAAATTCGCAGATCGAACCCTTATCTTACAACATGGGG
TGTTAAAATGA

Protein sequence : 
MKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITL
RREKIGLVFQQFHLIPYLNALENVMLSQYYHSSVDEEDTKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELL
LADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C8J_1565 YP_001483139.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-45 50
C8J_1565 YP_001483139.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 8e-26 44
C8J_1565 YP_001483139.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-30 44
C8J_1565 YP_001483139.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-36 44
C8J_1565 YP_001483139.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C8J_1565 YP_001483139.1 ABC transporter ATP-binding protein VFG0869 Protein 5e-21 41