|
Name : APECO1_O1CoBM24 (APECO1_O1CoBM24) Accession : YP_001481179.1 Strain : Genome accession: NC_009837 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 16301 - 17236 bp Length : 936 bp Strand : + Note : similar to YP_190149; identified by match to protein family HMM PF06067 DNA sequence : GTGATGAATATCTCTCCTGATTGTTGCAATCTTGTTAATGGAGATCGGGGGGGGGATGATATTAAGCGGAAAAATTTTTT ATTAAATTTATTCTTTCATAAAGGAGTAGCTGTTATGCGATTAGCTTCCCGTTTTGGTCGGTATAATTCCATCCGCCGTG AACGTCCTTTAACGGATGATGAATTAATGCAGTTCGTGCCTTCGGTATTTTCCGGTGATAAACATGAGTCCCGGAGTGAA CGTTATACGTATATTCCAACAATCAATATCATCAATAAGTTACGTGATGAAGGTTTCCAGCCATTCTTTGCCTGTCAGAG TCGGGTTCGTGATTTGGGACGTCGCGAATACAGTAAACATATGTTACGTCTTCGCAGGGAAGGGCATATTAACGGACAGG AAGTTCCTGAAATTATCCTGCTTAATTCACATGATGGTTCATCCAGTTATCAGATGATCCCCGGAATTTTTCGTTTTGTC TGCACAAATGGCCTGGTGTGCGGAAATAATTTTGGCGAAATCCGCGTTCCACATAAAGGTGATATTGTCGGGCAGGTTAT CGAGGGAGCGTATGAAGTGCTCGGTGTCTTTGATAAGGTCACTGATAATATGGAGGCGATGAAAGAAATTCATCTTAACA GTGACGAGCAACATTTATTTGGCAGAGCTGCACTGATGGTCAGGTATGAAGATGAAAATAAAACGCCAGTGACACCTGAA CAGATAATTACTCCCCGTCGTCGGGAAGACAAACAGAACGATCTCTGGACAACCTGGCAGCGGGTTCAGGAGAATATGAT AAAAGGTGGATTATCGGGGCGAAGTGCCTCCGGGAAAAATACCAGAACAAGAGCCATTACAGGTATTGATGGTGATATAA GAATCAACAAGGCGTTATGGGTGATTGCCGAACAGTTCAGAAAGTGGAAGTCATGA Protein sequence : MMNISPDCCNLVNGDRGGDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSE RYTYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGHINGQEVPEIILLNSHDGSSSYQMIPGIFRFV CTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPE QIITPRRREDKQNDLWTTWQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42096.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-82 | 64 |
| ECO103_3587 | YP_003223444.1 | hypothetical protein | Not tested | LEE | Protein | 1e-83 | 64 |
| Z1215 | NP_286750.1 | hypothetical protein | Not tested | TAI | Protein | 1e-83 | 64 |
| Z1655 | NP_287158.1 | hypothetical protein | Not tested | TAI | Protein | 1e-83 | 64 |
| z1215 | CAD33785.1 | Z1215 protein | Not tested | PAI I 536 | Protein | 3e-83 | 64 |
| yafZ | CAE85199.1 | YafZ protein | Not tested | PAI V 536 | Protein | 6e-86 | 64 |
| yafZ | YP_854321.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-81 | 64 |
| ORF_47 | AAZ04456.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 1e-81 | 64 |
| c5156 | NP_757004.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 2e-81 | 64 |
| unnamed | CAI43843.1 | hypothetical protein | Not tested | LEE | Protein | 3e-83 | 64 |
| aec71 | AAW51754.1 | Aec71 | Not tested | AGI-3 | Protein | 3e-83 | 64 |
| yafZ | ADD91704.1 | YafZ | Not tested | PAI-I AL862 | Protein | 3e-83 | 64 |
| SF2994 | NP_708768.1 | hypothetical protein | Not tested | SHI-1 | Protein | 1e-81 | 63 |
| unnamed | CAD66201.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 1e-81 | 63 |
| S3199 | NP_838482.1 | hypothetical protein | Not tested | SHI-1 | Protein | 1e-81 | 63 |
| ORF C80 | AAN62174.1 | conserved hypothetical protein; associated with oriT region on plasmids | Not tested | PAGI-2(C) | Protein | 2e-82 | 55 |
| ORF SG86 | AAN62307.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-79 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO1_O1CoBM24 | YP_001481179.1 | hypothetical protein | VFG1526 | Protein | 1e-83 | 64 |
| APECO1_O1CoBM24 | YP_001481179.1 | hypothetical protein | VFG1615 | Protein | 1e-82 | 64 |
| APECO1_O1CoBM24 | YP_001481179.1 | hypothetical protein | VFG0658 | Protein | 6e-82 | 63 |
| APECO1_O1CoBM24 | YP_001481179.1 | hypothetical protein | VFG1676 | Protein | 8e-82 | 63 |
