Gene Information

Name : APECO1_O1CoBM15 (APECO1_O1CoBM15)
Accession : YP_001481170.1
Strain :
Genome accession: NC_009837
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 11165 - 11425 bp
Length : 261 bp
Strand : +
Note : similar to AAR05684; identified by match to protein family HMM PF06006

DNA sequence :
GTGCGGGGCATCACCGGAGAGATGAGGATGAGCGAATATTTCAGAATACTTCAGGGACTGCCGGACGGTCCTTTTACCCG
CAAACAGGCCGAAGCCGTTGCCGCACAGTACCGGAATGTCTTTATCGAGGATGATCAGGGAACACATTTTCGCCTGGTTG
TCCGTCAGGATGGCACGTTGATCTGGCGCTCCTGGAATTTTGAGGACTGTGCCGGGTACTGGATGAACCGGTACATCAGG
GATTTCGGGATTCTTAAGTAA

Protein sequence :
MRGITGEMRMSEYFRILQGLPDGPFTRKQAEAVAAQYRNVFIEDDQGTHFRLVVRQDGTLIWRSWNFEDCAGYWMNRYIR
DFGILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 1e-13 61
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 4e-15 58
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-15 58
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-14 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_O1CoBM15 YP_001481170.1 hypothetical protein VFG1525 Protein 1e-15 58