Gene Information

Name : Spro_0922 (Spro_0922)
Accession : YP_001477156.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : IucA/IucC family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 1022806 - 1024551 bp
Length : 1746 bp
Strand : -
Note : PFAM: IucA/IucC family protein; KEGG: ypi:YpsIP31758_0714 aerobactin siderophore biosynthesis protein IucA

DNA sequence :
ATGACAATCCAGTTTGAAACCGCGACGACCGACGTGGCTGCACAATGTTTTCTCAACGCATTGATGCGTGAAACCCGGGA
CTGGCAAATCGTTCCGGCGGCCAGCCACCAACAGTATCCGCAACTGCACATTCCACTTTCGCCTTCTCAGGCTATTCGCA
TCGCTTTACGCCATACCTCCCCCACTCAGCATCACCAGTACCTGTTCCCCGCTTATCTGTATCAGCAGGATGACGGTGCA
GGGGTTGCGCTGAGCGTGGAACAGCTTATCTCCTTGCTGTTGGAAAAACCGGCGGTGAAAGGCGAATTGTCCGATGACGT
GGTGGCCCGTTTCCGCCAGCGTGTACTGGAAAGTCATGAAAATACCCAGCAGGCGATCAATATCCGTCTGGACTGGCCTG
CGCTGCGCGACAAGCCGCTGAACTTCGCCCAGGCGGAACAGGGGCTGCTGGTAGGGCACGCCTTTCACCCGGCACCGAAG
TCTCATGAGCCATTCAACCATCAGCAGGCGCACCGCTATCTGCCGGATTTTGCCGCCAGCTTCCCGCTGCGTTGGTTTGC
CGTCGATAAACGCCAACTGTGCGGTGACAGCCTGAATCTGACGCTGCAGCAGCGCCTGCAACGTTTTGCCGCCGAAAGTG
CCCCACAGCTGTTGGCACACTTTAGCGATAACGTCTGGCTGCTACCGATGCATCCGTGGCAGGCCGACCATTTACTGACG
CAGAACTGGTGCCAGGATCTGGTGACCCAGGGGCTGCTGCAGGATCTGGGCGAAGCCGGCGAACGCTGGCTGCCTACCAG
TTCTTCACGCTCGCTGTACAGCGCCAGTAACCGTGACATGATCAAATTCTCCCTCAGCGTGCGCCTGACCAACTCGGTGC
GCACCCTGTCGGTAAAAGAAGTGAAGCGCGGGATCCGTCTGGCACGTCTGGCGCAAACCCCGCGCTGGCAACAGTTGCAG
GCGCGCTATCCGACCTTCCGCGTAATGCAGGAAGACGGCTGGGCCGGTCTTCGCTCGGCAGACGGCACCGTCCAGGAAGA
AAGCCTGATGGCACTGCGCGATAACCTGCTGTTCGACCAGCCACAAAGCCAGACCAACGTGCTGGTGACCCTGACCCAGG
CCGCGCCGGATGGCGGCGACAGCCTGCTGGCTGCAGCGGTACGCCGTTTGGCCAGCCGCCTGAATCTGCCGTTGCAACAA
GCCGCCCACACCTGGCTGGATGCCTACTGCCAACAGGTGTTGCTGCCGCTGTTCAGTACCGAAGCCGATTACGGGCTGGT
GCTGCTGGCTCACCAGCAAAACATTCTGGTAGAGATGCAGCAGGACCTGCCGATCGGCATGCTGTATCGCGACTGTCAGG
GCAGTGGCTTTACCCGTGACGCCGGCCCCTGGCTGGAAGAAATTGGCGAAGCCGATGCGGAAAACCGCTTCAGCGAGCAA
CAGTTGCTGCGCTACTTCCCTTACTACCTGCTGGTGAACTCCAGCCTGGCAGTCACCGCCGCACTGGCTGCGGCCGGTTT
CGACAGTGAAGAGGCATTGATGGCCCGGGTACGCGACGCACTGAGCGGCCTGCGCGCCAACGCCAAAAACACCCTGTGCC
TGGACTACGTGCTCGACAGCAGCCACTGGAACTGCAAAGGCAACTTCTTCTGTTACCTGCACGACCATAACGAAAACACC
ATCGTTGATCCGGCGGTGATTTACTTTGATTTCGTTAACCCGCTGCGCCAGGGGGCTACCCAATGA

Protein sequence :
MTIQFETATTDVAAQCFLNALMRETRDWQIVPAASHQQYPQLHIPLSPSQAIRIALRHTSPTQHHQYLFPAYLYQQDDGA
GVALSVEQLISLLLEKPAVKGELSDDVVARFRQRVLESHENTQQAINIRLDWPALRDKPLNFAQAEQGLLVGHAFHPAPK
SHEPFNHQQAHRYLPDFAASFPLRWFAVDKRQLCGDSLNLTLQQRLQRFAAESAPQLLAHFSDNVWLLPMHPWQADHLLT
QNWCQDLVTQGLLQDLGEAGERWLPTSSSRSLYSASNRDMIKFSLSVRLTNSVRTLSVKEVKRGIRLARLAQTPRWQQLQ
ARYPTFRVMQEDGWAGLRSADGTVQEESLMALRDNLLFDQPQSQTNVLVTLTQAAPDGGDSLLAAAVRRLASRLNLPLQQ
AAHTWLDAYCQQVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPIGMLYRDCQGSGFTRDAGPWLEEIGEADAENRFSEQ
QLLRYFPYYLLVNSSLAVTAALAAAGFDSEEALMARVRDALSGLRANAKNTLCLDYVLDSSHWNCKGNFFCYLHDHNENT
IVDPAVIYFDFVNPLRQGATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-166 66
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-166 66
iucA AAD44746.1 IucA Virulence SHI-2 Protein 4e-166 66
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 2e-166 66
iucA AAK71631.1 IucA Virulence SHI-3 Protein 1e-149 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_0922 YP_001477156.1 IucA/IucC family protein VFG0615 Protein 2e-166 66
Spro_0922 YP_001477156.1 IucA/IucC family protein VFG0940 Protein 9e-167 66
Spro_0922 YP_001477156.1 IucA/IucC family protein VFG1081 Protein 6e-150 62