Gene Information

Name : Spro_0918 (Spro_0918)
Accession : YP_001477152.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 1016515 - 1018755 bp
Length : 2241 bp
Strand : -
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ypi:YpsIP31758_0710 TonB-dependent siderophore receptor

DNA sequence :
ATGATGAAGCGCAAACACCTCTGGGTATTAAATCCTTGTCTGCTGGCGATGATCGCACCAGCAGCAGCCTGGGCAGAAGA
ACAAAAAAGCGAAGAGCAAATGGTGGTTTCCGCCAGCCGTGCGCACCGTACCGTAGCAGAGATGGCGCAGACCACCTGGG
TGATTGAGAGCCAGGAAATTGAGCAACAGGTACAGGGCGGCAAAGAGATCAAGGACATGCTGGCGCAGTTGATCCCGGGG
ATGGACGTCAGCGGTCAGGGCCGAACCAACTACGGCATGAACCTGCGTGGCCGTTCAATGATGGTGATGATCGACGGCGT
GCGTTTGAACTCTTCGCGCAGCGACAGCCGCCAGTTGGATTCGATCGACCCGTTTAATATCGACCACATTGAAGTGATCT
CCGGTGCCACCTCGCTGTACGGCGGCGGCAGCACCGGCGGTTTGATCAACATCGTCACCAAAAAAGGCCAGAAAGAGCAG
CAGGTTGAGCTGCAGATCGGCGGCAAAACCGGCTTTGGCGGCCATAACGACCACGACGAAAACGTGGCGGCGGCGGTCAG
CGGCGGCAACGATAATGCCTCGGGCCGCCTGTCGGTCTCTTACCAGCGCTACGGCGGCTGGTACGACGGCAAGGGCAATG
AAGTCCTGATCGACAATACCCAGACTGGCCTGCAGTATTCCGATCGCCTCGACGTGATGGGTACCGGCACCATTAATATC
GACGATCACCAGCAGCTGCAACTGACCACCCAGTATTACAAAAGCCAGTCCGACGGCGACCACGGCCTGTTCCTGGGGGA
GAATTTCTCCGCGGTGACCGGCAGCGCCAAAGCTTATAACAGCGGCAACCTGAATTCGGATCGTATTCCTGGCACTGAAC
GTCACCTGATCAACCTGCAGTACTCCAATACCGATTTCCTCGGGCAGGATCTGGTGGCGCAGGTTTATTATCGCGATGAG
TCGCTGACCTTCTACCCGTTCCCGACGCTGGCGGGCAAAGCGCCGGACTACTACGTCAGCAGCATCGGTGCCTCGCAGCA
GAAAACCGATTTTTACGGCGGCAAGCTGACGCTGAACAGCAAACCGATCGACGCCCTGACGCTGACCTACGGCATCGACG
CCGAGCATGAAAGCTTCAACTCCAACCAGCAGTTCTTCGATCTGGCCAAGGCGCAACAGTCCGGCGGCATGGACTTGCAA
AACGCCTATAACACCGGGCGTTACCCAGGCTACACCACCAGCAATCTGGCCACCTTTATGCAGGCCAGTTACGATATCAA
CCCTATCTTTACCCTTAGCGGCGGTGTGCGTTATCAGTACACTGAAAACAAGATTGATGACTTTGTTGGCTATAACCAAC
AGCAGGCCATCGCCACCGGCGGCGCGACCTCAGCGGACGCGATCCCAGGTGGGAAAACCGACTATAACAACGCCCTGTTC
AACGCCGGCCTGCTGGCACACCTGACCGAACGTCAACAGACCTGGGTCAACTTCTCGCAGGGCTACGAGATCCCGGATCC
GGGCAAATATTACGGCAACGGCACTTATTCGCTGAACAACGGCCACTATCAGTTGAACAAAAGCGTCAACGTCGGCGATT
CCAAGCTGGAAGGCATTAAGGTTAACTCTTATGAGCTCGGCTGGCGCTATACCGGTGACAACCTGCGTACGCAGATCGCC
GGCTACTACTCACTGTCTGATAAGAGCATTTCGATCAACAAAACCGATATGACCATCAACGTCAATTCGGATAAGCGTCG
TATCTACGGGGTGGAAGGCGCGGTCGATTACTTCTTCGAAGACAGTGACTGGAGCGCGGGCACCAACTTCAACTTCATTC
GCTCCGAGACCAAGGTCAACGGCGAGTGGAAAAAACTGTTGGTTGACACGGCCAGCCCATCGAAAGTCACCGCCTATGTC
GGCTGGGCACCGGGCGACTGGAACCTGCGCCTGCAGTCGCAGCAGAGCTTCGACGTCTCGGATGACGGTGATTACACCAA
GGTCGGCTCCACTCAGGGCCGCAAAATTGATGGCTACAACACCATCGATTTCCTCGGCAGCTACGCCCTGCCGGTGGGTA
AACTCAGCTTTAGCGTAGAGAACCTGCTGGACAAGGAATACACCACCGTCTGGGGCCAGCGCGCACCGATCCTTTATAGC
CCAACCTACGGCTCACCAGAGCTTTACAGCTATAAAGGCCGTGGCCGCACCTTTGGCCTGAACTACTCCGTACTGTTCTG
A

Protein sequence :
MMKRKHLWVLNPCLLAMIAPAAAWAEEQKSEEQMVVSASRAHRTVAEMAQTTWVIESQEIEQQVQGGKEIKDMLAQLIPG
MDVSGQGRTNYGMNLRGRSMMVMIDGVRLNSSRSDSRQLDSIDPFNIDHIEVISGATSLYGGGSTGGLINIVTKKGQKEQ
QVELQIGGKTGFGGHNDHDENVAAAVSGGNDNASGRLSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSDRLDVMGTGTINI
DDHQQLQLTTQYYKSQSDGDHGLFLGENFSAVTGSAKAYNSGNLNSDRIPGTERHLINLQYSNTDFLGQDLVAQVYYRDE
SLTFYPFPTLAGKAPDYYVSSIGASQQKTDFYGGKLTLNSKPIDALTLTYGIDAEHESFNSNQQFFDLAKAQQSGGMDLQ
NAYNTGRYPGYTTSNLATFMQASYDINPIFTLSGGVRYQYTENKIDDFVGYNQQQAIATGGATSADAIPGGKTDYNNALF
NAGLLAHLTERQQTWVNFSQGYEIPDPGKYYGNGTYSLNNGHYQLNKSVNVGDSKLEGIKVNSYELGWRYTGDNLRTQIA
GYYSLSDKSISINKTDMTINVNSDKRRIYGVEGAVDYFFEDSDWSAGTNFNFIRSETKVNGEWKKLLVDTASPSKVTAYV
GWAPGDWNLRLQSQQSFDVSDDGDYTKVGSTQGRKIDGYNTIDFLGSYALPVGKLSFSVENLLDKEYTTVWGQRAPILYS
PTYGSPELYSYKGRGRTFGLNYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 67
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 67
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 67
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 67
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_0918 YP_001477152.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 67
Spro_0918 YP_001477152.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 67
Spro_0918 YP_001477152.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 66