|
Name : Spro_0886 (Spro_0886) Accession : YP_001477120.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 980289 - 982862 bp Length : 2574 bp Strand : + Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: yen:YE0893 Clp ATPase DNA sequence : ATGCGTCTGGATCGTCTTACTAACAAATTCCAGCTTGCCCTCGCCGATGCCCAATCTTTAGCCCTTGGGCGCGACAACCA GTTTATTGAACCGTTACATCTGATGAGCGCTCTGCTCAATCAGGACGGGGGCACGGTTCGTCCACTCTTAACTTCTGCCG GTATCGATGCAGGGCGCGTGCGCACTGAAATCGAGCAGGCACTGTCTCGTCAGCCTCAAGTCGAAGGTACCGGTGGTGAC GTTCAACCGTCCCATGAACTGGTGCGTGTCCTTAACCTGTGTGACAAGCTGGCGCAAAAGCGGGCGGACAAATTCATTTC TTCCGAACTCTTTGTACTGGCGGTGCTTGAGGATCGTGGAACATTGACCGATCTGTTGAAAGCGGCCGGTGCGACAACCG ATAAAATCAGCAAGGCTATTGAGCAAATGCGAGGTGGAGACAGCGTGGAAGAGCAGGGTGCTGAAGACCAACGTCAGGCA TTGAAGAAATACACTATTGATCTGACCGAACGTGCCGAGCAGGGCAAGCTTGACCCGGTTATCGGCCGTGACGAAGAGAT CCGTCGCACCATTCAGGTGCTGCAACGTCGTACCAAAAACAACCCGGTGTTGATCGGCGAGCCTGGCGTGGGTAAAACCG CCATCGTCGAAGGTTTGGCGCAACGCATCATTAATGGTGAAGTCCCGGAAGGCTTAAAGCATAAACGAGTGCTGTCCCTC GATATGGGGGCGCTGATTGCCGGGGCCAAGTACCGCGGTGAGTTTGAAGAGCGTCTGAAAGCGGTGCTGAGCGATCTGTC CAAACAGGAAGGCAGCGTCATTCTGTTTATTGATGAACTGCACACTATGGTTGGCGCGGGTAAAGCCGATGGCGCAATGG ATGCCGGCAATATGTTGAAACCGGCGCTGGCGCGTGGGGAACTGCACTGCGTCGGTGCCACCACGCTGGACGAATATCGC CAGTATATAGAGAAGGACGCGGCGCTCGAACGTCGTTTCCAGAAAGTCTATGTGGCGGAACCCAGCGTTGAAGACACCAT CGCTATCCTGCGAGGCCTGAAAGAACGTTATGAACTGCATCACCATGTGCAGATCACTGACCCGGCGATTGTTGCGGCAG CGACCTTGTCACACCGCTATATCTCCGATCGTCAATTGCCGGATAAGGCTATTGACCTGATCGATGAGGCGGCGTCCAGC ATCCGTATGCAGATGGACTCCAAGCCGGAATCGCTCGATCGTCTGGAGCGCCGCATTATTCAGCTTAAGCTGGAGCAACA GGCGCTGAGTAAAGAGTCGGACGACGCCAGCAAGAAACGTCTGGAAATGCTTAGCGGTGAGCTGGAGCAGAAAGAGCGTG AATATTCAGAGCTTGAAGAAGAGTGGAAAGCGGAAAAAGCCTCACTCTCCGGTACGCAGAATATCAAAGCGGAACTTGAG CAGGCCAAGATAACCCTGGAGCAGGCACGTCGCGTCGGCGATCTGGGGCGGATGTCGGAACTGCAGTACGGCAAGATCCC AGAGTTGGAAAAACAGCTTGCTGCCGCCACGCTGGCCGAAGGCAAAACCATGAAGCTGTTGCGTAACCGGGTGACCGACG CAGAAATTGCCGAAGTGTTGGCGCGAGCTACCGGTATTCCTGTTGCCAGAATGCTGGAAGGCGAGCGTGACAAGCTGTTG CGCCTGGAGCAGGAGCTGCATTCTCGGGTGATTGGCCAGGATGAAGCCGTGAGCGCGGTATCTAACGCCATTCGCCGTAG CCGAGCTGGGCTTTCAGATCCAAACCGTCCAATCGGTTCGTTCCTGTTCCTCGGTCCGACCGGGGTGGGGAAAACCGAAC TCTGTAAGGCGCTGGCCTCGTTCCTGTTCGACAGTGACGATGCCATGGTGCGTATCGATATGTCCGAGTTTATGGAAAAA CATTCGGTATCGCGGCTGGTGGGTGCGCCTCCGGGCTATGTCGGGTATGAAGAGGGCGGTTATCTGACCGAGGCGGTACG TCGTCGACCTTATTCAGTGATCCTGCTGGATGAAGTTGAGAAGGCGCACCCGGATGTATTCAACATTCTGCTGCAGGTCC TGGACGATGGGCGGCTGACCGATGGTCAGGGACGTACCGTTGATTTCCGTAATACCGTGGTGATCATGACTTCTAACCTG GGGTCCGATCTGATCCAGGAACACTTCGGTCAGATGAACTACGCGCAGATGAAGGAATCGGTGATGGAAATGGTCACGCA TCATTTCCGTCCGGAATTCATCAACCGTATAGATGAGGTGGTAGTGTTCCACCCACTCGGCCAGAAACACATTGCCGAGA TCGCCAAGATTCAGTTGGCGCGTCTGTACAAACGTCTGGAAGAGCGTGGTTACGAAGTCACTATGACCGAACCGGCGTTG GAGCTACTGGGTAAAACTGGTTTCGACCCTGTGTATGGTGCGCGTCCATTGAAACGCGCTATCCAGCAGGAGATCGAAAA CCCATTGGCGCAGCAAATCCTTTCCGGCAAGTTGATTCCGGGCAAACTGGTGACGCTGGATGTGGAAGACGAGCACATCG TCGCTAAACAGTAA Protein sequence : MRLDRLTNKFQLALADAQSLALGRDNQFIEPLHLMSALLNQDGGTVRPLLTSAGIDAGRVRTEIEQALSRQPQVEGTGGD VQPSHELVRVLNLCDKLAQKRADKFISSELFVLAVLEDRGTLTDLLKAAGATTDKISKAIEQMRGGDSVEEQGAEDQRQA LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSL DMGALIAGAKYRGEFEERLKAVLSDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS IRMQMDSKPESLDRLERRIIQLKLEQQALSKESDDASKKRLEMLSGELEQKEREYSELEEEWKAEKASLSGTQNIKAELE QAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATLAEGKTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLL RLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQEHFGQMNYAQMKESVMEMVTHHFRPEFINRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEPAL ELLGKTGFDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGKLVTLDVEDEHIVAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-103 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-97 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 8e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spro_0886 | YP_001477120.1 | protein disaggregation chaperone | VFG0079 | Protein | 6e-129 | 42 |
