Gene Information

Name : Spro_0833 (Spro_0833)
Accession : YP_001477067.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 926520 - 929075 bp
Length : 2556 bp
Strand : -
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAATAGTACCGATAAGCTCGATTCACACACCCCAATGATGCAGCAGTATCTGCGCCTCAAGGCACAGCACCCCGAGAT
CCTGCTGTTCTACCGCATGGGCGACTTTTACGAGCTGTTCTATGACGATGCCAAACGCGCTTCCCAACTGCTGGATATCT
CGCTGACCAAACGCGGTGCCTCAGCGGGCGAGCCCATTCCGATGGCCGGCGTCCCTCACCATGCGGTCGAGAACTATCTG
GCCAAACTGGTGCAGCTTGGTGAATCCGTCGCCCTGTGCGAACAAATCGGCGATCCGGCCACCAGTAAAGGCCCGGTGGA
ACGCAAAGTGGTGCGCATCGTCACGCCAGGCACCATCACCGACGAAGCCCTGCTGCAAGAACGTCAGGACAACCTGCTGG
CGGCCATCTGGCAGGACGCACGCGGCTTTGGCTACGCCACGCTGGACATCAGCTCAGGTCGTTTCCGCGTGGCCGAACCG
GCAGATATCGAAACCATGGCGGCAGAGTTGCAGCGCACTAATCCTGCCGAGCTGCTTTACCCCGAAACCTTTGAACAGAT
GTCGCTGATTGAACAGCGCCATGGCCTGCGCCGTCGCCCACTGTGGGAGTTTGAGCCCGAGACTGCACGCCAACAGCTGA
ATCTGCAGTTCGGCACCCGCGATCTGACCGGTTTCGGCGTTGAACAGGCCCATCAGGCACTGCGCGCCGCCGGTTGTCTG
CTGCAATATGTTAAAGATACTCAACGCACCTCATTACCGCATATCCGTGGCATCACCATGGAGCGCCAGCAGGATGGCAT
TATCATGGATGCCGCCACGCGGCGTAACCTTGAGCTGACCCAGAACCTGTCCGGCGGCAGCGAAAATACCCTGGCGGCCA
TCCTCGACCGCAGCGTGACGGCAATGGGTAGCCGTATGCTTAAGCGCTGGCTGCATATGCCGACCCGTGACATCAAAGTA
TTGAATAACCGTCAGCAGGCGATCGGCTCCCTGCAGGATCTGTATAGCGACCTGCAACCTTCGCTGCGTCAGGTGGGAGA
TCTGGAGCGCATATTGGCCCGTTTGGCATTACGCAGTGCCCGTCCACGCGATCTGGCCCGTATGCGTCATGCTTTCCAAC
AGTTGCCGGATATCCACGCGTTACTGAAAGGGGTAGAAACCCCGTATGTGCAACAGCTACTGTCACAGGTCGGTCAGTTT
GATGAACTGCAAGACTTGCTGGAACGCGCAGTGGTCGAAGCCCCACCGGTGCTGGTACGCGACGGCGGCGTTATCGCTCC
CGGCTACAATAGCGAGCTGGATGAATGGCGTGCACTGGCCGATGGAGCCACCGACTACCTCGACCGTCTTGAGATCCGCG
AGCGCGAAAAGCTGGGGCTGGATACGTTGAAGGTCGGCTTCAATGGCGTGCATGGTTATTACATTCAAGTCAGCCGTGGG
CAGAGCCACCTGGTACCGATCCACTATGTGCGCCGCCAGACGCTGAAAAACGCCGAACGCTACATCATTCCCGAATTGAA
AGAGTATGAAGACAAGGTCTTGACTTCCAAAGGGAAAGCGTTGGCGATCGAGAAGGGTCTGTACGAAGAGTTGTTCGACT
TGCTGTTGCCGCACCTGGGCGATCTACAGCAAAGTGCCGCTGCATTGGCCGAGCTGGACGTGCTGGCCAACCTGGCTGAA
CGTGCAGAAACGCTCAACTACGCCTGCCCAACCATCAGCGAACAGCCCGGTGTACGCATCACTGAGGGCCGCCATCCGGT
GGTCGAACAGGTACTGAGCGAGCCGTTTATTTCCAACCCGCTATCGCTGTCGCCTCAGCGGCGGATGTTGATCATTACCG
GCCCTAATATGGGCGGTAAAAGTACCTATATGCGCCAAACGGCGCTGATCGTGCTGATGGCACACATCGGCAGCTACGTG
CCGGCGAGCAAGGCGGTCATCGGCCCGGTAGACCGAATCTTTACCCGCGTGGGCGCGGCAGACGATCTGGCCTCCGGCCG
TTCTACCTTTATGGTAGAGATGACTGAAACCGCCAATATCCTGCACAATGCCACCGAAAACAGCCTGGTGCTGATGGATG
AAATTGGCCGCGGTACCTCAACCTACGACGGTCTCTCCCTGGCCTGGGCCTGCGCCGAGAACCTGGCCAGCCGCATTAAA
GCCATGACGCTGTTTGCTACCCATTACTTTGAGCTGACCACGTTGCCGGAGAAAATGGAAGGCGTGGTCAACGTACATCT
GGACGCGCTGGAGCACGGCGACACTATCGCCTTTATGCACAGCGTACAGGACGGTGCCGCCAGCAAGAGCTATGGCCTGG
CGGTTGCCGCTCTGGCAGGCGTGCCACGTGAGGTGATCAAACGCGCGCGCCAAAAACTGCGCGAGCTGGAGGCGATATCC
AGCCATACCGCGACGGGTACCGTTGATGCCACCCAGATGACGCTGCTGAATGAGGAAACCTCACCGGCGGTTGAAGCGCT
CGAGGCACTGGATCCGGACTCACTGTCACCTCGTCAGGCGCTGGAGTGGATTTACCGCCTGAAGAATATGGTCTGA

Protein sequence :
MNSTDKLDSHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHHAVENYL
AKLVQLGESVALCEQIGDPATSKGPVERKVVRIVTPGTITDEALLQERQDNLLAAIWQDARGFGYATLDISSGRFRVAEP
ADIETMAAELQRTNPAELLYPETFEQMSLIEQRHGLRRRPLWEFEPETARQQLNLQFGTRDLTGFGVEQAHQALRAAGCL
LQYVKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLSGGSENTLAAILDRSVTAMGSRMLKRWLHMPTRDIKV
LNNRQQAIGSLQDLYSDLQPSLRQVGDLERILARLALRSARPRDLARMRHAFQQLPDIHALLKGVETPYVQQLLSQVGQF
DELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKGLYEELFDLLLPHLGDLQQSAAALAELDVLANLAE
RAETLNYACPTISEQPGVRITEGRHPVVEQVLSEPFISNPLSLSPQRRMLIITGPNMGGKSTYMRQTALIVLMAHIGSYV
PASKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK
AMTLFATHYFELTTLPEKMEGVVNVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPREVIKRARQKLRELEAIS
SHTATGTVDATQMTLLNEETSPAVEALEALDPDSLSPRQALEWIYRLKNMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_0833 YP_001477067.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 85