Gene Information

Name : Spro_0777 (Spro_0777)
Accession : YP_001477011.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 866256 - 867701 bp
Length : 1446 bp
Strand : -
Note : PFAM: type II secretion system protein E; KEGG: eca:ECA3799 protein transport protein

DNA sequence :
ATGAGTACGGCAATCAGTGACGAAATCCATGCGCTGTGCCGCCGTTATCAGGCACTGGCTCTCAGCGAAGATCGGTACTG
CCTGAATGTGGCCCTGACTACGGAGGCGCCAGAGGCGCTGCTGTCGGCGCTGCGTTTCGCCACCGGCAAGCGCATTCATC
TGGAACAGTGGCCGGCCGCCCGGCTGGAAATGGAACTGAACCAACGACAAATACAAGGCGATCGACTCCCGCAAGAAGTG
CCGGAGACACAACCTGATGCACCCTCATTAAACGACGACAGCGACGCTCCCGTTGTGCAGTTTATCAATCAGACGCTGCG
CATCGCCATTCAACGGCGTGCCTCGGATATTCATTTCGAGCCTTACCAACAGACGCTACGTATCCGCCTGCGGATCGACG
GGGTACTGCAGGCGATAACCTCACCGCCATTCACGCTCGCCGCTCGCCTCATCGCCCGACTGAAGATCATGGGGCAGTTG
GACATTGCCGAACGTCGCCTGCCACAGGATGGTCAGCTCAGCGTGCAATTGGATAACGCCAGTTACTCGATGCGCATCGC
CACCCTGCCCACGCTGCACGGCGAAAAAGTGGTGCTGCGAGTCCTGCAAACCGAACGCCAGGAGCTACCGCTGGATCGGC
TGGGAATGGATCCGCCGGCGTTGGCGGAGTTTGCCGCGGCATTGTCCTGTCCACAGGGTATGATCCTGGTCACCGGCCCG
ACCGGCAGTGGTAAAACCGTGACGCTTTACAGCGGCCTGCGTCAGTTGAATGATGCGCAAAGTAATTTATGCAGCGTCGA
GGATCCGATCGAGATCCCGTTGTTTGGCGTTAACCAGACGCAAATTAATGCCAAAACCGACCTGGATTTTTCCCGCGTTT
TACGCGCCTTACTGCGACAAGATCCGGACGTGATCATGATCGGTGAAATCCGCGACAGGGAAACGGCAGAGATCGCGGTT
AAAGCCGCGCAAACCGGCCATCTGGTGCTATCCACATTGCACACCAACTCCACCAGCGAAACCCTGACGCGCCTGACCCA
TATGGGGATTCCCGGCTATCTGATTGCCGCCTGCCTGAAGCTGGTGATAGCCCAGCGGCTGGTGCGCAAACTTTGCAGCC
ACTGCCGCTATCAGCAAAGCCAGCCCGTACGCTTCCCTGCCGCCATTTGGGCCACGCCCCTGCTGCCCTGGCAGGCTGAT
GGTTGCGAACACTGCTTTAGCGGCTACTACGGCCGCACCGGGGTATATGAATTACTGACTATCACCCCAGAGGTGCAGGC
CGGGCTGTTACGGAGCGCCGCTCCTGGTGAACTGGCCGACATCGCCCAACAGCAAGGGCAGACAACGCTGCTGCAAGCCG
GATTAACGCTGGTTTCACAAGGCGTCACATCGCTGGAAGAGGTATACCGTATTGTCGGCATCATTGCCGGTGAGGAGGCA
CCGTGA

Protein sequence :
MSTAISDEIHALCRRYQALALSEDRYCLNVALTTEAPEALLSALRFATGKRIHLEQWPAARLEMELNQRQIQGDRLPQEV
PETQPDAPSLNDDSDAPVVQFINQTLRIAIQRRASDIHFEPYQQTLRIRLRIDGVLQAITSPPFTLAARLIARLKIMGQL
DIAERRLPQDGQLSVQLDNASYSMRIATLPTLHGEKVVLRVLQTERQELPLDRLGMDPPALAEFAAALSCPQGMILVTGP
TGSGKTVTLYSGLRQLNDAQSNLCSVEDPIEIPLFGVNQTQINAKTDLDFSRVLRALLRQDPDVIMIGEIRDRETAEIAV
KAAQTGHLVLSTLHTNSTSETLTRLTHMGIPGYLIAACLKLVIAQRLVRKLCSHCRYQQSQPVRFPAAIWATPLLPWQAD
GCEHCFSGYYGRTGVYELLTITPEVQAGLLRSAAPGELADIAQQQGQTTLLQAGLTLVSQGVTSLEEVYRIVGIIAGEEA
P

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-73 44
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-73 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_0777 YP_001477011.1 hypothetical protein VFG0112 Protein 3e-88 49
Spro_0777 YP_001477011.1 hypothetical protein VFG2426 Protein 1e-76 48
Spro_0777 YP_001477011.1 hypothetical protein VFG0182 Protein 3e-76 46
Spro_0777 YP_001477011.1 hypothetical protein VFG1876 Protein 3e-75 46
Spro_0777 YP_001477011.1 hypothetical protein VFG0233 Protein 1e-77 46
Spro_0777 YP_001477011.1 hypothetical protein VFG2048 Protein 2e-74 44