Gene Information

Name : Spro_0528 (Spro_0528)
Accession : YP_001476764.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : trehalose-6-phosphate hydrolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 580232 - 581896 bp
Length : 1665 bp
Strand : -
Note : KEGG: yen:YE3773 putative trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain

DNA sequence :
ATGAGCAATCCAATCCCCTGGTGGCAGAACGGCGTCATCTATCAAATCTATCCGAAGAGTTTTCAGGACAGCACCGGTAA
CGGTTACGGCGATCTGGCCGGTGTGACGGAGCGGCTGGACTACCTGCAGGAACTGGGCATCGACGCCATTTGGCTGACGC
CGGTGTATGTCTCGCCGCAGGTGGACAACGGTTATGACGTGGCAGACTACTGCGCCATCGATCCTGCCTACGGCACCATG
GAGGATTTTGATCGGCTGATTGCCGCCGCCCACCAGCGCAGCATCCGCATCGTGATGGATATGGTGTTCAACCACACTTC
GACCGAACACCCGTGGTTTAAAGCCTCGCAGGATCCTGAAAGCCCGTTCCGCCAGTTTTATGTCTGGCGCGACGGCGAAG
GCGATGCCCTGCCGAACAACTGGCGCTCCAAGTTTGGCGGCAACGCCTGGCAGTGGCACGCCGACAGTGGCCAGTATTAT
CTGCACCTGTTTGCCACCGAGCAGGCAGATCTCAACTGGGAGCACCCACCGGTGCGCGAAGAGCTGAAGAAGGTTTGTCA
GTTCTGGGCCGACAAAGGCGTCGACGGTCTGCGTCTGGACGTGATCAACCTGGTCTCCAAACAGCAGGATTTCCCGTCCG
ATAACCTGGGCGATGGCCGCCGTTTCTACACCGATGGCCCACGCATTCATGAATTTCTGCAGGAAATGAGCCGCGACGTG
TTTCAGCCGCGTGGCCTGATGACCGTCGGTGAAATGTCCTCCACCACGCTGGAACATTGCCGGCAGTACGCGGCGCAAAG
CGGCGAAGAGCTGTCGATGACTTTCAACTTCCACCACCTGAAGGTGGACTATGCCGGCGGCGAAAAATGGACGCTGGCGG
CGCCGAATTACGTCGAACTCAAACAGATTTTCAGCCATTGGCAGCAAGGCATGCACAATCAGGCGTGGAACGCGCTGTTT
TGGTGTAACCACGATCAGCCACGTATCGTTTCACGCTTCGGTGACGAGGGTGAACTGCGGGTGCCGGCCGCCAAGATGCT
GGCGATGGTGCTGCATGGCATGCAGGGCACGCCTTATATTTATCAGGGCGAAGAGATCGGCATGACCAATCCGGGCTTTA
ACTCCATAGAACAGTATCGCGATGTGGAAAGCCTGAACATGTACGCCGAACTCAGCGCGCAGGGGAAAAGTGACGCCGAG
CTGCTGGCGATCCTGGCCAGCAAATCCCGCGATAACGGCCGCACGCCAATGCAGTGGAGTAGCGCGCCAAACGCCGGTTT
CACCCAGGGCACGCCGTGGATTAGTTGTGCGGAAAACTATCCGCAGATCAACGCCGAAGCGGCGCTGGCCGATCTGGATT
CGGTGTTTTACGCCTATCGTCAGTTAATCACCCTGCGCAAACAGTACCCACTGCTGACCCACGGTGACTACCGTGACCTG
GCCCCTGCTCACCCGGCGTTGTGGTGCTATCAACGCAGCTGGAATGGCCAGCGCCTGCTGGTGGTGGCCAACCTCAGCCG
CGAGCCGCTTGCCTGGCAGGCCGAAGGTGTGGAGCCGTCTGCTTTATGGCGGCCGCTGATGGGCAACTACGCCGACGCCC
CAGCCCAGCCGCAGGCCACCAGCTTACGCCCGTTCGAAGCGGTGTGGTGGTTGCTGGAAGACTAA

Protein sequence :
MSNPIPWWQNGVIYQIYPKSFQDSTGNGYGDLAGVTERLDYLQELGIDAIWLTPVYVSPQVDNGYDVADYCAIDPAYGTM
EDFDRLIAAAHQRSIRIVMDMVFNHTSTEHPWFKASQDPESPFRQFYVWRDGEGDALPNNWRSKFGGNAWQWHADSGQYY
LHLFATEQADLNWEHPPVREELKKVCQFWADKGVDGLRLDVINLVSKQQDFPSDNLGDGRRFYTDGPRIHEFLQEMSRDV
FQPRGLMTVGEMSSTTLEHCRQYAAQSGEELSMTFNFHHLKVDYAGGEKWTLAAPNYVELKQIFSHWQQGMHNQAWNALF
WCNHDQPRIVSRFGDEGELRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPGFNSIEQYRDVESLNMYAELSAQGKSDAE
LLAILASKSRDNGRTPMQWSSAPNAGFTQGTPWISCAENYPQINAEAALADLDSVFYAYRQLITLRKQYPLLTHGDYRDL
APAHPALWCYQRSWNGQRLLVVANLSREPLAWQAEGVEPSALWRPLMGNYADAPAQPQATSLRPFEAVWWLLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-125 44