Gene Information

Name : rph (Spro_4847)
Accession : YP_001481068.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 5365179 - 5365895 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCTGCAGGCAGAGCACCACAACAAGTTCGCCCACTGACACTGACCCGTCACTACACCAAACATGCAGAAGGCTC
AGTGCTGGTTGAGTTTGGCGATACCAAGGTTTTGTGCACCGCCACGGTAGAAGAGGGCGTTCCGCGCTTCCTGAAAGGTC
AGGGCCAGGGTTGGATCACCGCTGAATACGGCATGCTGCCGCGTTCTACCCACAGCCGTAACGCCCGCGAAGCCGCAAAA
GGCAAGCAGGGTGGCCGTACGCTGGAAATTCAGCGTCTGATCGCCCGTTCACTACGTGCAGCGGTAGATCTGAAAAAGCT
TGGTGAGTTCACCATCACGCTCGACTGCGACGTCTTGCAGGCCGATGGTGGCACCCGTACCGCGTCTATTTCCGGTGCCT
GTGTTGCGTTGGCCGATGCGTTGAATGCGCTGGTGGCTAACGGCAAGCTGAAAGCCAACCCGATGAAAGGGCTGGTCGCT
GCAGTTTCCGTCGGCATTGTTAACGGCGAAGCGCTGTGTGATTTGGAGTACGTCGAAGACTCTGCAGCAGAAACCGATAT
GAATGTGGTGATGATGGAAGATGGCCGCATGATCGAGGTGCAGGGCACCGCCGAGGGCGAGCCGTTCAGCCACGATGAGC
TATTGGCGCTGTTGGCGCTGGCCCGAGGGGGCATCGATACCATCTTCCAGGCGCAGAAAGCGGCGCTGGCAGACTAA

Protein sequence :
MRPAGRAPQQVRPLTLTRHYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWITAEYGMLPRSTHSRNAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKKLGEFTITLDCDVLQADGGTRTASISGACVALADALNALVANGKLKANPMKGLVA
AVSVGIVNGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHDELLALLALARGGIDTIFQAQKAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-53 57