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Name : Spro_4723 (Spro_4723) Accession : YP_001480944.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 5217798 - 5220332 bp Length : 2535 bp Strand : - Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein DNA sequence : ATGGTGTTTATTCCTGCAAGGACGCGGTTTCGTATTCGGCTGTTGAGGGTCTGTATTTGTCTGGCGATGGGGTTTTCCGC GCAGCTGACTTATGCCGATGACGGTATTCAGTTTAATACCGACGTGCTGGATGTGAATGACCGGAAAAATATCGATCTGA GCCAGTTTTCCCGCAGTGGCTACATGATGCCGGGCCGTTATAGCCTGACGGTACATATTAATAAAAATGAGCTGCCGGAA CAGAACATCTCTTTCTATCCGCCGGACGATGACCCGAAAGGCAGCCAAGCCTGTCTGTCACCTACCCTGGTGGATCAACT GGGGCTGAAGGGAGAGGCGCAGAAAGCGCTGACCTGGTGGCACCAGGACGAATGTCTGGATATCTCCAGTTTGAAGGGGA TGGAAGCCCGTGGCGATCTGGCCACTGCGGCACTGTACCTGAGCATTCCCCAGGCTTATCTGGAGTACGCCTCGGCGGAC TGGGACCCGCCTTCGCGTTGGGATGAAGGTATTCCCGGGCTGTTGTTTGACTACAACCTTAATGGCCAGACTCAGTACCA GCAGCGGGATGGTTCGCAGAGCCATAGCTTGAGCGGCAACGGCGTAGCCGGCGCCAACCTGGGTGCCTGGCGGCTGCGCG CCGACTGGCAGGGGCAGCTAAACCGCCAGACTGGTCGCGGGCAGGGTACCGACCAGCAGTTGGACTGGAGCCGCTATTAC GCCTACCGGGCGCTGCCGGCACTGCGTTCGCGGCTGACGCTGGGGGAGGATTACCTCAACTCCGGCATGTTCGACAGCTT CCGCTTCAGCGGCGCTAGCCTGGTGTCGGACGACAACATGCTGCCGCCGAACCTGCGTGGCTATGCGCCGGAGGTTGCAG GTGTGGCGAAGACTAATGCCAAGGTGACCATCAGCCAGCAGGGCCGGGTAATTTACGAAACCCAGGTGGCAGCAGGACCG TTCCGCATTCAGGACATCAACGATGCGGTGTCCGGCGAACTGGAGGTGCGGGTGGAAGAACAGGACGGCAGCGTGCAGGC ATTCAAGATGAACACCGCCAGCATTCCGTACCTGACCCGGCCGGGCTCAGTGCGCTACAAGTTTGCCGCAGGGCGTCCGT CGGACTGGCAGCATCATACTGACGGCCCGTTGTTCGGCACCGGAGAGTTTTCCTGGGGGGTGAGCAACGGGTGGTCACTG TACGGCGGTGTGCTGAGCGGTGGCGATTATAACGCGGCGTCGTTGGGTATCGGCCGCGACCTGATGGCGCTGGGAGCGTT GTCGTTTGACGCCACCCAGTCGCGGGCGCGTTTGCCGCAGCAGGACGGCACGCTGAGCGGCGGCTCATACCGCCTGAGCT ATTCGAAGAGCTTTGACGAGTTGGACAGCCAGGTGACCTTCGCCGGTTACCGCTTCTCGGAACAAGACTTTATGAGCATG AGCGAGTACCTGGATGCACGCCATGAGGGCCGCCGGATGGGCAATAACAAGGAGATGTACACCATCACCTTTAGCAAGCA GTTCCGCGATGCCGGGGTCAGTTTATATCTGAACTACGACCACCAGACCTACTGGGACCGGCCGGTGAATGACCGCTATA ACCTGATGATGTCGCGTTACTTCGACATCGGCCGGTTCAAGAACCTGAGCCTGTCGCTGTCCGGTTACCGTAACAAATAC AACGGCAGCAACGACGACGGTATGTACCTGTCGTTGACGATGCCGTGGGGCAGCGGTGCCAACATCAGCTACAACACCGC GGTGAACCGTAACGACACCACTCATCGGGTGGGATATTACGACCGGGTTGACGAACACAACAACTACCAGCTGAGCGTGG GCAGTTCGCGCGGCGGCGCCAATCTGAGCGGTTATTACAACCACGAGGGTGATCTTGCTCAGATGAGCGCCAACGCCAGC TACCAGGAAGGCAGTTACAGTGCGCTGGGCTTCTCTGCTCAGGGCGGCGCGACGTTGACGACTCAAGGCGGCGCACTGCA CCGCATCGGCATGCCGGGTGCGACTCGCCTGCTGCTGGACACCGGCGGCGTGGCCGGGGTGCCGGTGCGTGGCTACGGCA GCACCAGCGACACCAACAGGTTCGGCAAGGCGGTGGTGACGGACGTGAGCAACTACTACCGCAACCAGGCCAGCATTGAT CTGAACAAGCTGGGCGATAACGCCGAGGCCACCAAATCGGTGGTGCAGGCCACCCTGACCGAGGGCGCGATCGGTTACCG CAAATTTGACGTGATCGCCGGGGAAAAGGCGATGGCGGTGATCACCCTGGCAGATGGCAGTACGCCGCCGTTCGGCGCCA CGGTGCTGAACGCCAGCAAACAAGAAACAGGGATAGTGAACGACGGCGGTAGCGTTTATCTGAGCGGCATTCGGGCCGGT GACCGTATGACGGTGCACTGGAGCGGTGCGGCGCAGTGCGCCATCAACCTGCCGAAAGTGCTGCCGGAAAGTACGCTGAG CAACCTGCTGTTGCCGTGCCAGACGCTGCCGGCGGATGAGTCAGACGCAACCTAA Protein sequence : MVFIPARTRFRIRLLRVCICLAMGFSAQLTYADDGIQFNTDVLDVNDRKNIDLSQFSRSGYMMPGRYSLTVHINKNELPE QNISFYPPDDDPKGSQACLSPTLVDQLGLKGEAQKALTWWHQDECLDISSLKGMEARGDLATAALYLSIPQAYLEYASAD WDPPSRWDEGIPGLLFDYNLNGQTQYQQRDGSQSHSLSGNGVAGANLGAWRLRADWQGQLNRQTGRGQGTDQQLDWSRYY AYRALPALRSRLTLGEDYLNSGMFDSFRFSGASLVSDDNMLPPNLRGYAPEVAGVAKTNAKVTISQQGRVIYETQVAAGP FRIQDINDAVSGELEVRVEEQDGSVQAFKMNTASIPYLTRPGSVRYKFAAGRPSDWQHHTDGPLFGTGEFSWGVSNGWSL YGGVLSGGDYNAASLGIGRDLMALGALSFDATQSRARLPQQDGTLSGGSYRLSYSKSFDELDSQVTFAGYRFSEQDFMSM SEYLDARHEGRRMGNNKEMYTITFSKQFRDAGVSLYLNYDHQTYWDRPVNDRYNLMMSRYFDIGRFKNLSLSLSGYRNKY NGSNDDGMYLSLTMPWGSGANISYNTAVNRNDTTHRVGYYDRVDEHNNYQLSVGSSRGGANLSGYYNHEGDLAQMSANAS YQEGSYSALGFSAQGGATLTTQGGALHRIGMPGATRLLLDTGGVAGVPVRGYGSTSDTNRFGKAVVTDVSNYYRNQASID LNKLGDNAEATKSVVQATLTEGAIGYRKFDVIAGEKAMAVITLADGSTPPFGATVLNASKQETGIVNDGGSVYLSGIRAG DRMTVHWSGAAQCAINLPKVLPESTLSNLLLPCQTLPADESDAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-169 | 47 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 1e-169 | 47 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-169 | 47 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-169 | 47 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 2e-168 | 46 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 1e-168 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spro_4723 | YP_001480944.1 | fimbrial biogenesis outer membrane usher protein | VFG1548 | Protein | 6e-170 | 47 |
| Spro_4723 | YP_001480944.1 | fimbrial biogenesis outer membrane usher protein | VFG0884 | Protein | 5e-170 | 47 |
| Spro_4723 | YP_001480944.1 | fimbrial biogenesis outer membrane usher protein | VFG0895 | Protein | 6e-170 | 47 |
